Moschus berezovskii (Chinese forest musk deer): 129538374
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Entry
129538374 CDS
T09065
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
mbez
Moschus berezovskii (Chinese forest musk deer)
Pathway
mbez04151
PI3K-Akt signaling pathway
mbez04382
Cornified envelope formation
mbez04510
Focal adhesion
mbez04512
ECM-receptor interaction
mbez04518
Integrin signaling
mbez04820
Cytoskeleton in muscle cells
mbez04926
Relaxin signaling pathway
mbez04933
AGE-RAGE signaling pathway in diabetic complications
mbez04974
Protein digestion and absorption
mbez05146
Amoebiasis
mbez05165
Human papillomavirus infection
mbez05200
Pathways in cancer
mbez05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mbez00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
129538374 (COL4A4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129538374 (COL4A4)
04518 Integrin signaling
129538374 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129538374 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
129538374 (COL4A4)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
129538374 (COL4A4)
09154 Digestive system
04974 Protein digestion and absorption
129538374 (COL4A4)
09158 Development and regeneration
04382 Cornified envelope formation
129538374 (COL4A4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
129538374 (COL4A4)
09162 Cancer: specific types
05222 Small cell lung cancer
129538374 (COL4A4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
129538374 (COL4A4)
09174 Infectious disease: parasitic
05146 Amoebiasis
129538374 (COL4A4)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
129538374 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mbez04147
]
129538374 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
mbez00536
]
129538374 (COL4A4)
Exosome [BR:
mbez04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
129538374 (COL4A4)
Glycosaminoglycan binding proteins [BR:
mbez00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129538374 (COL4A4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
129538374
NCBI-ProteinID:
XP_055254504
LinkDB
All DBs
Position
Unknown
AA seq
1686 aa
AA seq
DB search
MALVRRSFRCNKLLATDSWSLILILFSVQYACGGGKKFIGLCGGRDCSLCQCFPEKGSRG
QPGPPGPQGPIGPLGPPGPTGIPGEKGMKGDSGRPGAAGDKGDKGPTGVPGFPGLDGIPG
HPGPPGSRGRPGIDGYNGSRGDPGIPGERGALGPRGPPGLPGDKGEKGNSVFILGATKGM
QGDRGDPGPPGSPGSRGVRGPAGPAGYPGEPGLAGPTGPPGSPGLKGNPGVGVKGQMGDP
GEVGQQGSPGPTLLVQPPDSGLYKGEKGIKGMPGMTGPPGLPGPKGEPGIGRKGEKGIPG
FPGPRGDPGSYGSPGFPGLKGEPGLFGDPGSFGFLGPKGDPGDRGHPGPPGVLVTPSLPL
KGPPGDPGHPGRYGETGAVGPRGPPGAPGRPGEACAGMTGPPGPRGFPGHPGFPGAAGVP
GRADSAPGKPGNQGPTGLPGVPGLPGLPGSDVVYCTLGQPGPQGIKGKAGPPGRRGSKGE
KGNSGLCACQPGPVGPPGPPGPPGRQGSKGDLGLPGWLGEKGSPGFPGAKGSPGPPGKPG
ASGLPGSKGEKGDTVVSRVKGHKGERGPDGPPGLPGQQGQHGRDGYAGEKGDTGPPGDHE
DAAPGDKGPPGPPGPPGRAGSRGPPGLGFPGPPGERGQPGAPGCPGNRGPDGRKGRKGDT
IPCNVTYPGRPGPPGFDGPPGPKGLPGHRGAPGLRCLDGQKGQRGKPGISEKPGPPGFRG
DTGEPGLGGEKGSSPVGPPGTPGSPGVNGQKGPPGDPAVGYPGLPGKSGLPGTPGSKGLR
GDAGRPGTVGPAGMPGFPGLQGPKGREGNAGFPGIPGPPGHSCERGAPGIPGQPGLPGAT
GSPGAPGWKGQRGDMGPLGPAGMKGLPGVPGRPGADGTPGLPGVPGPTGDDGLPGLPGPK
GPQGLPGFLGFPGERGKPGQDGHPGRKGEHGEKGWPGFLGDRGLKGVKGARGPPGYEGEM
DIISKKGETGEPGPSGDGGFPGENGDKGHPGMQGRRGEPGSYGPPGFHPGEPGRNGQPGL
PGPPGPPGSPGLRGIIGFPGFPGDQGEPGSPGRLGPSGIDGTRGPKGYKGESASQFGLPG
PKGEPGSPGYPGRLGSSGEQGLPGAQGPGGSPGRPGPPGFSGPTGCPGNPGEPGLQGPPG
EVGDPGPRGILGDSGAPGLPGIKGPSGSPGLNGLHGLKGQKGSKGASGSHEMGPPGPVGM
PGPKGETGDPGNPGISPLGLFGERGPPGPPGPPGRVGLPGPPGAPGKALKDDIPDPGLPG
DQGPPGLDGPRGKPGPSGPPGSVDFLKGEPGDYGLPGPPGLPGPPGPPGHKGFPGCDGKH
GQKGPMGFPGPQGPPGSPGSPGDKGLPGPPGRQGPLGPPGEPGPPADLEACPRIPGLPGV
AGPRGPEGTMGLPGMRGPPGPGCKGEPGLDGRRGEDGLPGSPGLPGHKGDMGEAGCPGAP
GPPGPVGDPGPIGFGPGYLSGFLLVLHSQTDGEPTCPMGMPRLWTGYSLLYLEGQEKAHS
QDLGLAGSCLPIFSTLPFAYCNIHQVCHYARRNDRSYWLASTAPLPMTPLSEDEIRPYIS
RCAVCEAPAQAVAVHSQDQSIPPCPRAWRSLWIGYSFLMHTGAGDQGGGQALMSPGSCLE
DFRAAPFLECQGRQGTCHFFANKYSFWLTTVRPDLQFSSAPLPDTLKESHAQRQKISRCQ
VCVKHS
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atggcattggtaaggcgttctttcaggtgcaacaagctcttggccacagattcctggtca
ctcatacttattctcttttccgtacaatatgcatgtgggggtggaaagaagtttatcggt
ctctgtggaggaagagattgctctctttgccagtgctttcctgaaaagggatctcggggt
caaccgggaccaccagggccacagggtccgattggacccctgggaccaccaggacccact
gggatcccaggagagaaagggatgaaaggtgacagtggccgtcctggagcagcaggtgac
aagggtgacaagggtccaactggagttcctggatttccaggtctggatgggatacctggg
cacccagggcctcctggatccagaggcagacctggcatagatggctacaatggctcaaga
ggcgatccagggattccaggagaaagaggcgctcttggcccacgaggccccccaggcctt
cctggagataaaggagaaaaaggaaattcagtgttcattttaggtgccactaaaggtatg
cagggcgacagaggggacccaggacctcccggctcaccaggatcaaggggagtgagaggc
ccagcaggcccagcggggtacccaggagagcccgggttagcaggacctacaggcccccct
gggagtccaggcttaaagggtaatcctggcgtgggagtaaaggggcaaatgggagacccg
ggtgaggttggccaacaaggttctccgggacccactctgttggtgcagccacctgattct
ggtctctataaaggagaaaagggtattaaaggaatgcctggaatgactggacctcctgga
ctaccgggacccaagggagaacctggcattgggagaaaaggagagaaagggattcctggg
tttccaggacctcggggggaccctggttcctatggatctccaggttttccaggattaaag
ggggaaccaggactgtttggagatcctgggtcatttggatttcttggcccaaagggagat
cctggagaccgtgggcacccaggaccaccaggggttttggtaactccatctcttccactc
aaaggccctccaggggatccagggcaccccggtcgctatggagaaacaggggctgttgga
ccacgtggtcctcctggtgccccaggtagaccaggggaagcctgtgcaggcatgacggga
cctcctgggccacgagggtttcctggtcacccaggatttccaggggcagctggtgttcct
gggagagctgattctgctccaggaaaaccaggtaaccagggaccaactgggctgcctgga
gtgccaggactgccgggacttccaggatcagatgttgtatattgtactcttgggcaacct
ggaccacaaggaataaagggcaaagcgggtcctccaggaagacgaggctccaaaggagaa
aaagggaactcagggctctgtgcctgccagcccggtcccgtgggcccaccaggccctcca
gggcctcctgggaggcaagggagtaagggagacttgggactccctgggtggcttggagaa
aaaggttccccaggctttcccggtgccaaaggatctccagggccaccaggaaaacctggt
gcctccggactacctggcagcaaaggagaaaaaggtgacacggttgtatcaagagtgaaa
ggacacaaaggagaaagagggcctgatgggccccctggacttccagggcagcagggacaa
cacggtcgagatggatatgctggagaaaagggggatacagggccgcctggtgatcacgaa
gatgcagccccaggtgataaagggcctcctggaccgccaggcccccctggcagagcagga
tctagggggcccccaggcctgggatttcctggccctccaggagagagagggcaaccagga
gctccaggctgccccggcaacaggggtcctgatggtcggaaaggtcggaaaggtgataca
attccttgtaacgtaacataccctgggaggccaggccctccaggttttgatggtcctcca
ggtccaaagggacttccaggtcatcggggtgctcctgggctgaggtgtttggatggacaa
aagggtcaacgtggcaaaccaggaatctcagaaaaacctgggccacctggtttccgtggt
gatacaggagaaccaggtttgggaggtgaaaaggggtcctcccctgttgggcccccaggc
actccaggttcacctggagtgaatggtcagaaaggacccccaggagatcctgctgtcggc
tacccaggactcccgggaaagagcggtcttccaggaacaccagggtccaaaggactcaga
ggcgatgccgggcgtccagggaccgtagggccagctggcatgcccggatttccaggtctc
caaggtcctaaaggccgagagggaaatgctgggtttccagggatcccaggcccacctggt
cactcctgtgaaagaggtgccccagggataccagggcaaccggggctccctggggctaca
ggcagtccaggtgccccaggttggaaaggacagcgaggggacatggggcctctgggacct
gctggaatgaagggcctccctggagtcccgggacggccaggggcagatggaaccccaggt
cttccaggggtcccaggccccactggagacgatgggctacctggtcttccaggcccaaag
ggaccgcaggggctccctggcttcctgggttttccgggagagagaggaaaacctggtcag
gatggacaccctggcagaaagggagaacacggagagaagggttggcctggcttcctggga
gaccgaggattgaaaggtgtcaaaggagcaagaggacccccgggatatgaaggagaaatg
gatattatttccaagaagggggaaactggagaacctggaccttctggggatggcggattc
ccgggagaaaatggtgataaaggtcatcctgggatgcaaggaaggagaggagagccagga
agctatggaccacctggatttcaccctggggagcccggaagaaatgggcagccagggctt
cctggacccccaggccctccaggctcacctgggctgagagggatcattggttttccagga
tttccgggtgaccagggtgagccaggctctccagggcgcctgggaccttcaggaattgat
ggtacaagaggacctaaaggatacaaaggggaatctgcaagtcagtttggcctacccggt
ccaaagggtgagccaggtagtcccggatatccaggacgtttgggatcatctggagagcag
ggcttgcccggtgctcaaggtcctggaggatcacccggaaggccaggacctcctggcttc
tctggaccaacaggatgtccgggtaatccaggggagcctgggctgcagggacccccagga
gaagtgggggatcctggaccaagaggcatcctgggggactcaggggcaccaggtcttcca
ggaataaaaggtccctctgggtcgcccggcctgaacggcttgcatggtttgaagggtcag
aaaggcagcaaaggcgcttcaggttcacatgaaatgggccccccgggtccagtgggaatg
cccggccctaaaggggagacaggagaccctgggaacccaggaatttctcctctggggctt
tttggagaaagaggtcccccgggtcccccaggacccccagggagagttggactgcctggt
cctccaggtgccccaggaaaagctcttaaggatgacattccagacccgggtctgcctgga
gatcagggacctcctggcctcgatggtccaagaggaaaacccgggccttcaggaccgcct
gggagtgtcgactttctgaaaggggaaccaggagactatggtctgccagggcctccaggt
ctcccgggcccaccaggccctccaggacacaaaggcttcccaggatgtgatggaaaacat
ggccagaaaggaccaatgggattcccggggccacaggggccacctggaagtcctgggtca
cctggagacaaaggtttacctggacctccaggcagacaagggcctttgggtcctccgggt
gagcctgggcccccagcagacttggaggcctgcccccgaatcccagggcttcctggggta
gcaggcccgagaggaccggaaggaaccatggggcttcctggcatgagaggcccgccggga
ccagggtgcaaaggagagcccgggctggatggcaggaggggtgaggatggcctcccaggg
tcccctgggcttccgggacataaaggtgacatgggagaagcaggctgtccaggagcgcca
ggccctcctgggcccgtaggggatcctgggcccatagggtttggccctggatacctcagt
ggcttcctcctggttcttcacagtcagacggacggagaacccacctgccccatgggcatg
cccaggctctggactgggtatagtctcctatacctggaaggacaggagaaagctcacagt
caagacctaggtctggcgggctcctgcctccccatctttagcacgctgcccttcgcctac
tgcaacatccaccaggtgtgccactatgcccggaggaacgacaggtcctactggctggcg
agcactgcgcctctgcccatgacgccgctctcagaggacgagatccgcccgtacatcagc
cgctgcgccgtgtgcgaggcccccgcccaggccgtggcagtgcacagccaagaccagtcc
atccccccgtgtccgcgggcctggaggagcctctggatcgggtactccttcctcatgcac
acaggtgctggggaccaaggaggcgggcaggccctcatgtccccaggcagctgcctagag
gatttcagagccgcaccattcctggaatgccaaggccggcagggaacttgccactttttt
gccaacaagtatagtttctggctgacaacggtaagacctgacttgcagttttcctctgca
ccgttaccggacaccttgaaagaaagccatgctcaacgccagaaaatcagcaggtgccag
gtctgtgtgaagcatagctaa
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integrated database retrieval system
