Moschus berezovskii (Chinese forest musk deer): 129539425
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Entry
129539425 CDS
T09065
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
mbez
Moschus berezovskii (Chinese forest musk deer)
Brite
KEGG Orthology (KO) [BR:
mbez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mbez03041
]
129539425 (DDX1)
03016 Transfer RNA biogenesis [BR:
mbez03016
]
129539425 (DDX1)
Enzymes [BR:
mbez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129539425 (DDX1)
Spliceosome [BR:
mbez03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129539425 (DDX1)
Transfer RNA biogenesis [BR:
mbez03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
129539425 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
DUF5766
Motif
Other DBs
NCBI-GeneID:
129539425
NCBI-ProteinID:
XP_055256000
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKATIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATKGLTKGKHYYEVSCHDQGLCRVGWSSMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEVPPHMKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFVALSKAPESFVVKSQHTGNAQVAQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRIHNQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDEVHAKDNTRPGAN
SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRTLGGGNYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctccgagatgggtgttatgcctgagattgcacaagctgtggaagagatg
gattggcttctcccaactgatatccaggctgaatccatccccctgatcctaggaggaggt
gatgtccttatggctgcagaaacaggaagtggaaaaactggggctttcagtattccggtt
attcagatagtgtatgaaactctgaaagaccaacaagaaggcaaaaaaggaaaagcaaca
attaaaactggtgcttcagtgctgaacaaatggcaaatgaacccgtatgacagaggatct
gctttcgcaattgggtcagacggtctttgttgtcagagcagagaagtaaaggaatggcat
ggatgcagagccaccaaaggcttaacgaaagggaagcactactatgaggtatcctgtcat
gaccaagggttgtgcagagttgggtggtcttccatgcaggcgtccctagacctcggtact
gacaagtttggatttggctttggtggaacagggaagaaatcccacaacaagcagtttgat
aattatggagaggaattcactatgcatgataccattggatgttacctagatatagataaa
gggcatgtcaaattctccaaaaacggcaaagaccttggtctggcatttgaagtaccacca
catatgaagaaccaagccctgtttcctgcctgtgttttgaagaacgcggaactcaaattt
aacttcggggaagaagaattcaagtttccacccaaagatggtttcgttgccctttccaag
gcaccggagagttttgttgtcaagtcgcagcacacaggtaacgcgcaggtggcacaaaca
aagtttctccccaacgctccaaaagctcttattgtcgagccttcccgggagttggctgaa
caaactctgaataacgtcaagcagtttaagaaatacattgataatcctaagttaagggag
cttctgataattggaggtgttgcagcacgggatcagctctctgttttggataacggggtg
gatattgtcgttggcactccaggaagactggatgatctggtgtctacaggaaagctgaac
ttatcccaagttagattcctggtcctggatgaagctgatggacttctttctcaaggttac
tctgattttatcaataggattcacaatcagattcctcagattacctctgatggaaaaaga
cttcaggtgattgtgtgctcagccactttgcattcttttgatgtgaagaaactgtctgag
aagatcatgcacttccccacgtgggtcgatttgaaaggagaagattctgttccagacact
gtccaccatgttgttgtcccagtgaaccccaaaactgacagactctgggaaaggcttggg
aaaagccacattaggactgatgaagttcatgcgaaagataacacaagacctggtgctaac
agtccggagatgtggtctgaagctattaaaatcctgaagggggagtatgctgtccgagcc
atcaaggaacacaagatggatcaagcaattattttctgtagaaccaagatcgactgtgac
aacttggagcagtattttatgcagcaaggaggaggacctgataaaaagggacatcagttc
tcatgtgtttgtcttcatggtgacagaaagcctcatgagaggaagcaaaacttggaaagg
ttcaagaaaggagatgtcagattcttgatttgcacagatgtagctgccagaggaattgat
atccacggtgttccttatgtcataaatgtcaccttgcctgatgaaaagcaaaactatgtc
catcgcattggcagagtaggaagagctgaaaggatgggtctggccatttccctggtggca
acagaaaaagagaaggtttggtatcatgtatgtagcagccgtgggaaagggtgttataac
acaagactcaaggaagatggtggctgtaccatatggtacaatgagatgcagttgctgtcc
gagatagaagaacacctgaactgcaccatttctcaggttgagccagatataaaagtacca
gtagatgagtttgatgggaaagttacttacggccagaaaagaactcttggcggtggaaac
tataaaggccacgtggatattttggctcctacggttcaagagttggctgcccttgaaaag
gaggcccagacatctttcctgcatcttggctaccttcctaaccagctgttcagaaccttc
tga
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