KEGG   Moschus berezovskii (Chinese forest musk deer): 129539555
Entry
129539555         CDS       T09065                                 
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
  KO
K10653  tripartite motif-containing protein 54
Organism
mbez  Moschus berezovskii (Chinese forest musk deer)
Pathway
mbez04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:mbez00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    129539555 (TRIM54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mbez04121]
    129539555 (TRIM54)
Ubiquitin system [BR:mbez04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    129539555 (TRIM54)
SSDB
Motif
Pfam: zf-RING_UBOX zf-C3HC4_2 RING_XB3-XBAT31 zf-C3HC4 zf-B_box zf-RING_5 zf-RING_2 zf-C3HC4_4 zf-C3HC4_3 zf-RING_6 PHP Sina_RING Mod_r DUF349 DUF1421 FlgN COG2_C MIF4G_like_2 UvrD_C DUF5799 zf-RING_11
Other DBs
NCBI-GeneID: 129539555
NCBI-ProteinID: XP_055256250
LinkDB
Position
Unknown
AA seq 397 aa
MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRSSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEDEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEENSRRQKQLLNQRFEGLCAVLEERKGELLQALAREQE
EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGTMSKVELAG
RPEPGYERMDQFTVSVEHVAEMLRTIDFQPGTSGEEEDEEVAVEGEEGNAGPEEERTDGR
ENPAHPGPGPRMVNDLNRDHRATQPGAPPRGRGSIKS
NT seq 1194 nt   +upstreamnt  +downstreamnt
atgaacttcacggtgggtttcaagccgctgctaggggatgcacacagcatggacaacctg
gagaagcagcttatttgccccatctgcctggagatgttctccaaaccggtggtgatccta
ccctgccagcacaacctgtgccgcaagtgcgccaacgatgtcttccaggcctcgaaccct
ctgtggcagtctcggagctccaccactgtgtcttcagggggccgtttccgctgcccatct
tgcaggcacgaggtggtcctggaccgacatggcgtctatggtctgcagcggaacctgctc
gtggagaacattatcgacatttacaagcaggagtcctcccggccactgcattccaaggct
gagcagcacctcatgtgtgaggagcatgaagacgagaagatcaatatctactgtctgagc
tgtgaagtgcccacctgctctctctgcaaggtctttggtgcccacaaggactgtgaggtg
gccccactgcccaccatttacaaacgccagaagagtgagctcagcgatggcatcgcgatg
ctggtggccggcaatgaccgtgtgcaagcagtgatcacacagatggaggaggtgtgccag
accatcgaggaaaacagccggaggcagaagcagttgctgaaccagagatttgagggcctg
tgtgcagtgctggaggagcggaagggtgagctgctgcaggcgctggcccgggagcaggag
gagaagctgcagcgagtcaggggcctcatccgccagtacggagaccacctggaggcctcc
tctaagctggtggagtctgccatccagtccatggaggagccgcagatggcgctctacctg
cagcaggccaaggagttgatcaataaggtcggaacgatgtcgaaggtggagctggccggc
cggccggagccgggctatgaaagaatggatcagttcaccgtgagcgtggagcatgtggcc
gaaatgctgagaaccatcgacttccagccaggcacttctggggaggaagaggatgaggag
gtcgcggtagaaggggaagagggcaacgcaggaccagaggaagagcggacggatgggcgg
gaaaatcctgcgcacccgggtcccggccctcggatggtgaacgacctgaacagagaccac
cgtgccacccagcccggcgccccgccgcgggggaggggttcaataaagagctag

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