Moschus berezovskii (Chinese forest musk deer): 129547786
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Entry
129547786 CDS
T09065
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mbez
Moschus berezovskii (Chinese forest musk deer)
Pathway
mbez03082
ATP-dependent chromatin remodeling
mbez04714
Thermogenesis
mbez05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mbez00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129547786 (SMARCC1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
129547786 (SMARCC1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
129547786 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbez03021
]
129547786 (SMARCC1)
03036 Chromosome and associated proteins [BR:
mbez03036
]
129547786 (SMARCC1)
Transcription machinery [BR:
mbez03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129547786 (SMARCC1)
Chromosome and associated proteins [BR:
mbez03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129547786 (SMARCC1)
PBAF complex
129547786 (SMARCC1)
GBAF(ncBAF) complex
129547786 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
BRCT_2
DUF919
SpeFL
Motif
Other DBs
NCBI-GeneID:
129547786
NCBI-ProteinID:
XP_055269677
LinkDB
All DBs
Position
Unknown
AA seq
1105 aa
AA seq
DB search
MAAAAGGGGLATTAGAAGAGVAAAATGLAVYRRKDGGPASKFWESPETVSQLDSVRVWLG
KHYKKYVHTDAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCH
ILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQSNCLARPNIYLIPDIDLKL
ANKLKDIIKRHQGTFTDEKSKASHHVYPYPSSQEDEEWLRPVMRKDKQVLVHWGFYPDSY
DTWVHSNDVDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDENRKPVSFRQRI
STKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKE
EDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEETVTTGG
KEDEDPGKGDQSRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK
SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD
PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQIPAAQQMLNFPEKNKEKPLDLQNFG
LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH
FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE
EFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEK
METDTDAQQSEKAENKGENETDEGDKAHDGENEKNSEKEQDSEVSEDTKSEEKETEENKE
LTDSCKERESDVGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV
ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQ
QQHGPNPQQAHQHSGGPGLAPLGAAGHPSMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGP
GSMMPGQPMPGRMMPTVAASIHPPGSGPTLPGMPPIPGNILGPRVPLTAPNGMYPPPPQQ
QPPPPASADGGPPPPAPGPPASAAP
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcggcgggcggcggcggcctggcgacgacggctggcgccgcgggcgcaggg
gtcgcggcggcggccacgggcctggccgtttatcggcggaaggacgggggcccggcgagc
aagttttgggagagcccggagacggtgtcccagctggattcggtgcgggtctggctgggc
aagcactacaagaagtatgttcacacggatgctcctaccaataaaacactggctgggctg
gtggtacagcttcttcagttccaggaagatgcctttgggaagcatgtcaccaacccggcc
ttcaccaagctcccggcaaaatgtttcatggatttcaaagctggaggcaccttgtgtcac
attcttggggctgcttacaaatacaaaaatgaacagggatggcggaggtttgatctgcag
aatccatcccgaatggatcgtaatgttgaaatgtttatgaatattgaaaaaacactggtt
cagagcaattgtctggccagacccaacatctacctcattccagacattgatctgaagttg
gctaacaaattgaaagatataatcaaacgacatcagggaacatttactgatgagaagtca
aaagcttcccaccatgtttatccatatccttcctcacaagaggatgaagagtggttgaga
cctgtgatgagaaaagacaagcaggtgttagtgcactgggggttttaccctgacagctat
gatacttgggtccatagtaatgatgttgatgcagaaattgaagatccaccaattccagaa
aaaccatggaaggttcatgcaaaatggattttggacactgacgttttcaatgaatggatg
aatgaggaggattatgaggtggatgaaaacaggaagcccgtgagttttcggcagcgaatt
tcaacaaagaatgaagagccagtcagaagtccagagagaagagatagaaaagcatcagct
aatgctcgaaagaggaaacattcaccttcccctccaccccccacacccacagaatcccgg
aagaagagtgggaagaaaggccaagctagtctttatgggaagaggagaagtcagaaagag
gaagatgagcaagaagatcttaccaaggacatggaagacccaacacctgtacccaacata
gaggaagtggttcttccaaaaaatgtaaacccaaagaaagatagtgaaaatacacctgtt
aaaggaggaactgtggcagatctagatgagcaggatgaagaaacagtcacgacaggagga
aaggaagatgaagatcctggcaaaggtgatcagagtagatccgttgaccctggtgaagat
aatgtgactgagcagaccaatcacattattattcctagctatgcatcatggtttgattat
aactgtattcatgtgattgaacggcgtgcacttcctgagtttttcaatggaaaaaacaaa
tccaagactccagagatatacttggcctatcgaaattttatgattgacacataccgccta
aatccccaagaatatttaaccagcactgcttgtcgaaggaacttaactggagatgtgtgt
gctgtgatgagggttcatgcctttttagaacagtgggggcttgttaattaccaagtggat
ccagaaagtcgacccatggcaatgggaccacctccaactcctcatttcaatgtgttagct
gataccccctcggggcttgttcctctacatcttcggtcacctcagattcctgctgctcag
cagatgttaaattttcctgagaagaacaaggaaaaaccacttgatttgcagaactttggt
cttcgtactgacatctactccaagaaaaccttagcaaagagtaaaggtgctagtgctgga
agagaatggactgagcaggagactcttctactgttggaggctctggagatgtataaggat
gattggaacaaagtgtcagagcatgttggaagtcgcactcaggatgaatgcatcctccac
ttcttgaggcttcccattgaggacccgtaccttgagaattctgatgcttccctggggccc
ctggcctaccagcctgtccccttcagtcagtcaggaaacccagtcatgagcactgttgct
tttttggcatctgtggtggatcctcgtgtggcgtctgctgcagccaaagcagctttggag
gagttttctcgggtcagggaggaggtgcccctggaattggtggaggctcatgtcaagaaa
gttcaagaagcagcccgagcctctgggaaggtggatcccacctacggcctggagagcagc
tgcattgcaggcacggggccagatgagccagagaaactggaaggagctgaagaggaaaaa
atggaaacagatactgatgctcagcagtctgaaaaggcagaaaacaaaggggaaaatgaa
acagatgaaggtgataaagcacacgacggagaaaatgaaaaaaacagtgaaaaggaacag
gatagtgaagttagcgaggataccaaatcagaagaaaaggagactgaagagaacaaggaa
ctcactgattcttgtaaagaaagagaaagtgatgttgggaagaagaaagtagaacatgaa
atttctgaaggaaacgtagccacagccgcagcagctgctcttgcctcagctgcaacgaaa
gccaagcacctggctgccgtggaagaaagaaagatcaagtctctggtagctctcctggtt
gagacgcaaatgaagaaactggagattaaacttcgacattttgaagaactagaaactatc
atggacagagagaaagaagctttagaacaacagaggcagcagttgcttacggagcgccag
aacttccacatggagcagctgaaatacgccgagttgcgagcccgacagcaaatggaacag
cagcagcatgggccgaaccctcaacaggcacaccagcactcaggaggacccggcctggcg
ccgctgggagcagcaggacatcccagcatgatgcctcatcagcagccccctccctaccct
ctgatgcaccaccagatgccaccgcctcatccaccccagccaggtcagataccaggtcca
ggttccatgatgcctgggcagcccatgccaggccgcatgatgcccaccgttgcagccagc
atccacccccctgggagtggccccacccttcctggtatgcctccaatcccaggaaacatc
ttaggaccccgggtacccctcacggcacctaatggcatgtatcctcctccgccgcagcag
cagccaccacctccagcatctgcggacggaggccctccgcctcccgctcctggcccacca
gcctcggctgcaccctag
DBGET
integrated database retrieval system
