Moschus berezovskii (Chinese forest musk deer): 129548024
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Entry
129548024 CDS
T09065
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
mbez
Moschus berezovskii (Chinese forest musk deer)
Brite
KEGG Orthology (KO) [BR:
mbez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mbez04121
]
129548024 (PDZRN3)
Enzymes [BR:
mbez01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129548024 (PDZRN3)
Ubiquitin system [BR:
mbez04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
129548024 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
Sina_ZnF
zf-TRAF
zf-C3HC4_4
zf-RING_5
TRAF3_RING
Prok-RING_4
PDZ_Tricorn
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
129548024
NCBI-ProteinID:
XP_055270310
LinkDB
All DBs
Position
Unknown
AA seq
1060 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCAHAARGCGRVVKLQQLPEHLERCDFAPARCRHAGCGQV
LLRRDVEAHMRDACDARPVGRCQEGCGLPLTHGEQSAGGHCCARALRAHNAALQARLGAL
HKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVAAPPGG
KGEETKSLTLVLHRDSGSLGFNIIGGRPCVDNQDGSSSEGIFVSKIVDSGPAAKDGGLQI
HDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPPSESQTVDTGTQT
DITFEHIMALTKMSSPTPPVLDPYLLPEEHPSAHEYYDPNDYIAGIHQEMDREELELEEV
DLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN
REEAVALLTSEENKNFSLLIARPELQLDEGWLDDDRNDFLDDLHMDMLEEQHHQAMQFTA
SVLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNGDDAPAASPPL
AGQRKLTCSQDTLGSGDLPFSNESFISADCADADYLGIPVDECERFRELLELKCQVKSAS
PYGLYYPGGALDASKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLKEQFREPWM
LHNSGFRNYNTSVDVRRRELADITELPEKSDKDSSSAYNTGESCRSTPLTLETSPDNSLR
RAAEGQGAAEAYGPSPKNLLSITEDSEGGSPNYSPSPKELAPSPAPESQEGKPGEDGGGG
GSPTPGTKPGGSCLPPFPRSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSMC
KDLNSANQSEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSGMTTDDDAVSE
LKLGRYWSKEERKQHVVKAKEQRRRREFMLQSRLDCLKEQQGADDRKEMNILELSHKKMM
KKRNKKIFDNWMTIQELLTHGAKSPDGTRVYNSFLSVTTV
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggaccgcttcgacggcgacgtggacccggacctgaagtgcgctctg
tgccacaaggtcctggaggacccgctgaccacgccgtgcggccacgtcttctgcgccggc
tgtgtgctgccctgggtggtgcaggagggcagctgcccggcgcgctgccgcggccgcctc
tcggccaaggagctcaaccacgtcctgccgctcaagcgcctcatcctcaagctggacatc
aagtgcgcgcacgcggctcgcggctgcggccgggtggtcaagctgcaacagctgcccgag
cacctcgagcgctgcgacttcgcgcccgcgcgctgccgccacgcgggctgcggccaggtg
ctgctgcggcgagacgtggaggcgcacatgcgcgacgcgtgcgacgcgcggccggtgggc
cgctgccaggagggctgcgggctgccgctgacgcacggcgagcagagcgccgggggccac
tgctgcgcgcgggccctgcgggcgcacaacgccgcgctgcaggcccgcctgggcgcgctg
cacaaggcgctcaagaaggaggcgctgcgggccggcaagcgcgagaagtccctggtggcg
cagctggccgccgcgcagctggagctgcagatgaccgccctgcgctaccagaagaagttc
accgagtacagcgcgcgcctggactcgcttagccgctgcgtggccgcgccgcccggcggc
aagggtgaagaaacaaaaagcctgactcttgtcctgcatcgggactccggctccttggga
ttcaacatcattggtggccggccatgtgtggacaaccaagatggatcgtccagtgaagga
atctttgtatccaaaatagttgacagtgggcccgcagccaaggatggaggcctgcaaatt
cacgacaggattattgaggtcaatggcaaagacttatccagagcaactcatgaccaggct
gtggaagccttcaagacagccaaggaacccatcgtggtccaggtgttgaggagaacaccg
cggaccaaaatgttcactcctccgtcagagtcacagacggtggacacaggaacacagaca
gacatcacctttgagcacatcatggctcttaccaagatgtcctcgcccaccccgcctgtg
ctggatccctatctcttgccagaggagcatccctcagcccatgaatactatgatccgaac
gactacatcgcaggcatccatcaggagatggacagggaggagctggagctcgaggaggtg
gatctctacagaatgaacagccaggacaagctgggcctcacggtgtgctaccggacagat
gatgaagatgacatcggcatctatataagcgagattgaccctaacagcatcgcagccaag
gacgggcgcattcgagaaggagaccgcattatccagattaatgggatagaagtacagaac
cgtgaagaggctgtagctctgctaaccagtgaagaaaacaagaacttctcactgctaatc
gccaggcccgaactccagctggacgagggttggctggatgacgacagaaacgactttctg
gacgacctgcacatggacatgctggaggagcagcaccaccaggccatgcagttcacggcc
agcgtcctgcagcagaagaagcacgaggaagacgggggaaccacagacacagccaccatc
ctgtccaaccagcacgagaaggacagcggcgtgggccggacggatgagagcacgcgcaac
gacgagagctcggagcaggagaacaacggcgacgacgcccccgcagcctccccgccgctg
gccgggcagaggaagctcacgtgcagccaggacaccctgggcagtggtgacctgcccttc
agcaacgagtccttcatctcggccgactgcgccgacgccgactacctgggcatccccgtg
gacgagtgcgagcgcttccgcgagctgctggagctcaagtgccaggtgaagagcgccagc
ccctacggcctctactaccccggcggcgccctggacgccagcaagagcgaccccgagagc
gtggacaaggagctggagctgctcaacgaggagctgcgcagcatcgagctggagtgcctc
agcatcgtgcgcgcgcacaagatgcagcagctcaaggagcagttccgcgagccctggatg
ctgcacaacagcggcttccgcaactacaacaccagcgtggacgtgcgcaggcgcgagctg
gccgacatcaccgagctgcccgagaagtccgacaaagacagctcaagcgcctacaacacc
ggcgagagctgccgcagcaccccgctcaccttggagacgtcccccgacaactccctgcgg
agggcggccgagggccaaggtgccgcggaggcgtacgggccgtcccccaagaacctgctc
tccatcacggaagactccgaggggggctccccgaactacagcccttccccgaaagagctg
gcgcccagcccggctcccgagagccaggagggaaagcccggcgaagacggcggcggcggc
gggagccccaccccaggcacgaagccgggcggctcatgcctgccgcccttcccgcgctcg
ccctacaagcacgcccacatccccgcgcacgcgcagcactaccagagctacatgcagctg
atccagcagaagtcggccgtcgagtacgcgcagagccagatgagcctggtgagcatgtgc
aaggacctgaactccgccaaccagtcggagccgaggatggagtggaaggtgaagatccgc
agcgacggcacgcgctacatcaccaagcggccggtgcgggatcgcctgctgcgcgagcgc
gcgctcaagatccgcgaggagcgcagcggcatgaccacggacgacgacgcggtgagcgag
ctgaagctggggcgctactggagcaaggaggagaggaagcagcacgtggtgaaggccaag
gagcagcggcggcggcgcgagttcatgctgcagagccgactcgactgcctgaaggagcag
cagggggccgacgacaggaaggagatgaatatcctcgaactcagccacaaaaagatgatg
aagaagaggaataaaaagatatttgacaactggatgacaatccaagaactcttaacccac
ggcgcaaaatcgccagacggcactagagtatacaattcattcctctcggtgactactgta
taa
DBGET
integrated database retrieval system
