Moschus berezovskii (Chinese forest musk deer): 129548841
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Entry
129548841 CDS
T09065
Symbol
COL6A1
Name
(RefSeq) collagen alpha-1(VI) chain
KO
K06238
collagen type VI alpha
Organism
mbez
Moschus berezovskii (Chinese forest musk deer)
Pathway
mbez04151
PI3K-Akt signaling pathway
mbez04510
Focal adhesion
mbez04512
ECM-receptor interaction
mbez04820
Cytoskeleton in muscle cells
mbez04974
Protein digestion and absorption
mbez05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
mbez00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
129548841 (COL6A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129548841 (COL6A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129548841 (COL6A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
129548841 (COL6A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
129548841 (COL6A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
129548841 (COL6A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mbez04147
]
129548841 (COL6A1)
00536 Glycosaminoglycan binding proteins [BR:
mbez00536
]
129548841 (COL6A1)
Exosome [BR:
mbez04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129548841 (COL6A1)
Glycosaminoglycan binding proteins [BR:
mbez00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129548841 (COL6A1)
Hyaluronan
Extracellular matrix or blood plasma proteins
129548841 (COL6A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
129548841
NCBI-ProteinID:
XP_055271671
LinkDB
All DBs
Position
Unknown
AA seq
1027 aa
AA seq
DB search
MRLRRALLPLLLQVCWASAQDDPAASRAIAFQDCPVDLFFVLDTSESVALRLKPYGALVD
KVKSFTKRFIDNLKDRYYRCDRNLVWNAGALHYSDEVEVIRGLTRMPDGRGALQSSVDAV
KYFGKGTYTDCAIKKGLEELLVGGSHLKENKYLIVVTDGHPLEGYKEPCGGLEDAVNEAK
HLGIKVFSVAITPDHLEPRLSIIATDHTYRRNFTAADWGQSRDAEEVISQTIDTITDMIK
NNVEQVCCSFECQPARGPPGPRGDPGYEGERGKPGLPGEKGEAGDPGRPGDLGPVGYQGM
KGEKGSRGEKGSRGPKGYKGEKGKRGMDGVDGMKGETGYPGLPGCKGSPGFDGIQGPPGP
KGDAGAFGLKGQKGEPGADGEPGRPGSTGPPGDEGEPGEPGPPGEKGEAGDEGNAGPDGA
PGERGGAGERGPRGTPGARGPRGDPGEAGPQGDQGREGPVGVPGDPGEAGPIGPKGYRGD
EGPPGTEGPRGAPGPAGPPGDPGLMGERGEDGPPGNGTEGFPGFPGYPGSRGPPGINGTK
GYPGLKGDEGEAGDPGEDNNDIAPRGAKGAKGYRGPEGPQGPPGHVGPPGPDECEILDII
MKMCSCCECKCGPIDILFVLDSSESIGLQNFEIAKDFIVKVIDRLSRDELVKFEPGQSHA
GVVQYSHNQMQEHVDLRDPSIRSAQDLKEAIKKLQWMGGGTFTGEALQYTRSRLLPPTQN
NRIALVITDGRSDTQRDTTPLSVLCGPDIQVVSVGIKDVFGLAAGSDQLNVISCQGLAPQ
GRPGISLVKENYAELLDDSFLKNITAQICIDKKCPDYTCPITFSSPADITILLDGSASVG
SHNFDITKRFAKRLAERFLTASRTDPGQDVRVAVVQYSGTGQQRPERAALQFLQNYTVLA
NTVDAMDFFNDATDVMDALGYVTRLYRETSPGTAKKRLLLFSDGNSQGATPAAIEKAVQE
AQRAGLEIFAVVVGRQVNEPHVRVLVTGKAAEYDVAFGERHLFRVPSYQALLRGVFYQTV
SRKVALD
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcgccgtgctctgctccccctgctgctgcaggtctgctgggcctccgcgcag
gacgaccccgcggcctcgagggccattgccttccaagactgccctgtggacctgttcttt
gtgctggacacctctgagagcgtggccttgaggctgaagccctatggggccctggtggac
aaggtcaagtccttcaccaagcgcttcattgacaacctgaaagacaggtactaccgctgt
gaccgcaacctggtgtggaacgcgggcgcgctgcactacagcgacgaggtggaggtcatc
cgcgggctcacgcgcatgcccgacggccgcggcgcgctccagagcagcgtggacgccgtc
aagtacttcggcaagggcacctacaccgactgcgccatcaagaagggcctggaggagctg
ctggtggggggctcccacctgaaggagaacaagtacctgatcgtggtgactgatgggcac
cccctggagggctacaaggagccctgcgggggcctggaggatgctgtgaacgaggccaag
catctgggcatcaaagtcttctccgtggccatcacgcccgaccacctggagccacgtctg
agcatcatcgccacggaccacacgtaccggcgcaacttcacggcggccgactgggggcag
agccgcgacgccgaggaagtcatcagccagaccatcgacaccatcacggacatgatcaaa
aataacgtggagcaagtgtgctgctccttcgagtgccagcccgccagaggaccccccggg
cctcgaggtgaccccgggtatgagggagaaagagggaagccggggctcccgggagagaaa
ggagaagctggagaccctggaagacctggggaccttggacccgtcggctaccagggcatg
aagggagaaaaagggagccgaggggagaagggctccaggggacccaaaggctacaagggc
gagaagggaaagcgtggcatggacggcgtggatggcatgaagggggagacagggtaccct
ggcctgccaggctgcaagggctcgcccggattcgacggtatccaaggaccccccgggccc
aagggcgacgcaggtgcctttggactgaaaggacagaagggtgagcctggagcagacggg
gagcctgggaggccagggagcacgggaccccccggagatgagggtgagcctggagagccc
ggtcctccgggagagaagggagaagccggcgatgagggaaacgcagggccagacggagcc
cccggagagaggggcggcgctggcgaaagaggacctcgagggaccccaggtgcccggggc
ccaagaggagacccgggtgaagctggaccccaaggtgaccagggacgagaaggccccgtc
ggcgtccccggtgacccgggcgaggctggccccattgggccgaaaggataccgaggtgat
gaggggcccccggggactgagggccccagaggagctccggggcctgcaggcccccccgga
gaccccgggctgatgggtgagaggggtgaagacggcccccccgggaatggcactgaaggt
ttccctggctttcccggctatccaggcagcagaggtcctcctgggataaacggcaccaaa
ggctaccccggcctcaagggggacgagggagaagccggggaccccggagaggataataat
gacattgctccgagaggcgccaaaggagcaaagggctaccgaggtcccgaaggcccccag
ggacccccaggacacgtgggaccaccggggccagacgaatgcgagattttggacatcatc
atgaaaatgtgctcttgctgtgagtgcaagtgtgggcccatcgacattctcttcgtgctg
gacagctctgagagcatcggcctacagaacttcgagatcgccaaggacttcatcgtcaag
gtcattgaccggttgagcagggacgagctggtcaagtttgagcctgggcagtcgcacgcg
ggcgtggtgcagtacagccacaaccagatgcaggagcacgtggacctgagggaccccagc
atcaggagtgcccaggacctcaaggaggccatcaagaagctgcagtggatgggcgggggc
accttcacgggcgaggccctgcagtacacccggagccggctgctgccgcccacccagaac
aaccgcatcgccctggtcatcacagatggccgctcggacacccagagggacaccacccca
ctcagcgtgctctgcggccctgacatccaggtggtctccgtgggcatcaaggatgtcttt
ggcttggccgcgggctccgaccaactcaacgtcatctcctgccaaggcctggcaccccag
ggacggccgggcatctcactggtcaaggaaaactacgccgagctgctggacgacagcttc
ctgaagaatatcaccgcccagatctgcatagacaagaaatgtccagattacacctgccca
attaccttctcctccccggccgacatcaccatcctcctggacggctcagccagcgtgggc
agccacaactttgacatcaccaaacgctttgccaagcggctggcagagcgcttcctgaca
gcgagccggacagacccgggccaggacgtgcgtgtggcagtggtgcaatacagcggcacg
gggcagcagcggccggagcgtgcggccctgcagttcctgcagaactacactgtgctggcc
aacacggtggatgccatggacttcttcaatgacgccaccgacgtcatggacgccctgggc
tatgtgacccgcctctaccgcgagacctcccctggcaccgccaagaagaggctgctgctc
ttctcggatggcaactcgcagggtgccacgccggccgccatcgagaaggcagtgcaggag
gcccagcgggcgggcctggagattttcgccgtggtggtgggccgccaggttaacgagccc
cacgtgcgtgtcctggtcaccggcaaggcggctgagtatgacgtggccttcggcgagcgc
cacctgttccgcgtgcccagctaccaggcgctgctgcggggcgtcttctaccagacggtg
tccaggaaggtggcgctagactaa
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integrated database retrieval system
