KEGG   Moschus berezovskii (Chinese forest musk deer): 129548893
Entry
129548893         CDS       T09065                                 
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
mbez  Moschus berezovskii (Chinese forest musk deer)
Pathway
mbez03420  Nucleotide excision repair
mbez04120  Ubiquitin mediated proteolysis
mbez05161  Hepatitis B
mbez05170  Human immunodeficiency virus 1 infection
mbez05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:mbez00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    129548893 (DDB1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    129548893 (DDB1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    129548893 (DDB1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    129548893 (DDB1)
   05161 Hepatitis B
    129548893 (DDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mbez04121]
    129548893 (DDB1)
   03400 DNA repair and recombination proteins [BR:mbez03400]
    129548893 (DDB1)
Ubiquitin system [BR:mbez04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     129548893 (DDB1)
DNA repair and recombination proteins [BR:mbez03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      129548893 (DDB1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      129548893 (DDB1)
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_RIG_2nd Beta_propel
Other DBs
NCBI-GeneID: 129548893
NCBI-ProteinID: XP_055271770
LinkDB
Position
Unknown
AA seq 1140 aa
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGENKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRE
TDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVAC
LDITPLGDSNGMSPLCAIGLWTDISARIAKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH
NT seq 3423 nt   +upstreamnt  +downstreamnt
atgtcgtacaactacgtggtaacggcacagaagcccactgccgtgaacggctgcgtgacc
ggacacttcacttcagcggaagacttgaacctgttgattgccaaaaatacgagattagag
atctatgtggtcacggctgaggggcttcggcccgtcaaagaggtgggcatgtatgggaag
attgctgtcatggagcttttcaggcccaagggggagaacaaggacctactgtttatcctg
acagctaagtacaacgcctgcatcttggagtataagcagagcggcgagagcattgacatc
ataactcgagctcatggcaatgtgcaggaccgaattggccgcccctcagagacgggcatt
attggtatcattgaccccgagtgccgaatgatcggcctgcgactctatgatggcctgttc
aaggtgattccactagaccgggacaataaagagctcaaggcctttaacatccgcctggag
gagttgcacgttatcgacgtcaagttcttatatggttgccaagcacctaccatctgcttt
gtctaccaggaccctcaggggcggcacgtaaaaacctatgaggtgtctctccgagagaag
gagttcaataagggcccttggaaacaggaaaacgtagaagctgaagcttccatggtgatt
gcagtccccgagcccttcggaggcgccatcatcattggacaggagtcgatcacgtatcac
aatggtgacaaatacctggcaattgcccctcctatcattaagcaaagcacaattgtgtgt
cacaatcgagtggaccccaatggctctcgctatctgctgggagacatggaaggacggctc
ttcatgctgcttttggagaaggaggagcagatggatggcaccgtcaccctcaaggatctc
cgtgtggagctccttggggagacctctattgccgagtgcttgacgtaccttgacaatggt
gttgtgtttgtcggttctcgccttggtgattcccagcttgtgaagctcaatgttgacagc
aatgaacaaggctcctacgtagtggccatggaaacctttaccaatttgggacccattgtg
gacatgtgtgttgtggacctggagaggcaggggcagggacagctggtcacttgctctggg
gcattcaaggaaggttccttgcgaatcatccggaacggaattggaatccacgagcatgcc
agcattgacttgccaggcatcaaaggcctgtggccactgaggtctgatcccaaccgggag
accgatgacactttggtgctctcttttgtgggccagacaagagttctcatgttaaacgga
gaggaagtagaagaaaccgagctgatgggttttgtggacgatcagcagactttcttctgt
ggcaacgtggctcatcaacagcttatccagatcacttcagcatctgtgaggctggtctct
caagagcccaaagcactcgtcagtgagtggaaggagcctcagggcaagaacatcagcgtg
gcctcctgcaacagcagccaggtagtagtcgccgtggggagggccctctactacctgcag
atccatcctcaggagctccggcagatcagccacacagagatggagcacgaagtggcctgc
ttggacattacccctctaggggacagcaatggaatgtcccctctttgtgccatcggcctc
tggacagacatctctgcccgaattgcgaagctgccctctttcgagctactgcacaaagag
atgctgggtggagagatcattccccgttccattctgatgaccacctttgaaagcagccac
tacctcctttgtgccttgggagacggagcactcttctactttgggctcaacatcgagaca
ggcctgttgagcgaccgtaagaaggtgactctgggcacccagcccacggtattgagaact
ttccgttctctttcaaccaccaacgtctttgcttgctctgaccgccccactgtcatctac
agcagcaaccacaaattggtcttctccaatgtcaacctcaaggaagtgaactacatgtgt
cccctcaattcagatggctatcctgacagcctggcactggccaacaacagcactctcaca
attggcaccatcgacgagatccagaagttgcacattcggacagttcctctctatgaatct
cccaggaagatctgctatcaggaggtatcccagtgcttcggggtcctctccagccgcatc
gaagtccaggacacgagtgggggtacaactgctctgaggcccagcgccagcacccaggcc
ctgtccagcagcgtcagctccagcaagctgttctccagcagcacagcccctcacgagacc
tcctttggagaagaggtggaggtgcataacctccttatcattgaccagcacacctttgaa
gtgcttcacgcccaccagtttctgcagaatgagtatgccctcagcctggtctcctgtaag
ctgggcaaagaccccaacacgtacttcatcgtgggcacggccatggtatacccagaagag
gcagagcccaagcagggtcgtattgtggtctttcagtattcagatggaaaactgcagact
gtggctgaaaaggaggtgaagggggccgtgtactccatggtggagtttaatgggaagctg
ttagccagcatcaacagcacggtgcggctttatgagtggacgacggagaaggagctccgc
accgagtgcaaccactacaacaacatcatggcgctctacctgaagaccaagggcgacttc
atcctggtgggcgacctgatgcgctcggtgctcctgctggcctacaagcccatggagggc
aacttcgaagagattgctcgagactttaaccccaactggatgagtgctgtggaaatcttg
gatgatgacaatttcctgggggctgaaaatgcctttaacttgtttgtgtgtcagaaggat
agcgctgccaccacggatgaggaacggcaacacctccaagaggttgggcttttccacttg
ggcgagttcgtcaatgtcttttgtcacggctctctggttatgcagaacctgggagagacc
tccacccccacacagggctcggtgctcttcggcacggtcaatggcatgattggcctggtg
acctcattgtcagagagctggtacaacctcttgttggacatgcagaatcgactcaataaa
gtcatcaaaagtgtgggcaagattgagcactccttctggagatcctttcatactgaacga
aagacagaaccagccaccggcttcattgatggcgacttgattgagagtttcctggatatc
agccggcccaagatgcaggaagttgtggcaaacctacagtatgacgatggcagcgggatg
aagcgagaggccactgcggatgacctgatcaaggtggtggaggagttaactcggatccat
tag

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