Moschus berezovskii (Chinese forest musk deer): 129549053
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Entry
129549053 CDS
T09065
Symbol
PCF11
Name
(RefSeq) pre-mRNA cleavage complex 2 protein Pcf11 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
mbez
Moschus berezovskii (Chinese forest musk deer)
Pathway
mbez03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mbez00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129549053 (PCF11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbez03021
]
129549053 (PCF11)
03019 Messenger RNA biogenesis [BR:
mbez03019
]
129549053 (PCF11)
Transcription machinery [BR:
mbez03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129549053 (PCF11)
Messenger RNA biogenesis [BR:
mbez03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
129549053 (PCF11)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCF11_RFEG_rpt
PCF11_charged
Pcf11_helical
CID
Pfc11_Clp1_ID
Pcf11_C
zf_PCFS4
SHOCT
Motif
Other DBs
NCBI-GeneID:
129549053
NCBI-ProteinID:
XP_055272075
LinkDB
All DBs
Position
Unknown
AA seq
1685 aa
AA seq
DB search
MSEQTPAEAGTAGAREDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEA
QTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRS
TWDEIFPLKKLYALDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEESSTPGTVV
SSPSISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV
QQETSNLGPGSAPSKLHVSQIPPMAVKAPHQVPVQPEKSRPGPSLQIPDTKGTNRDPRLN
RMSQHSSHGKDQSHRKEFLMNTLNQSDIKTSKTVPSEKLNSSKQEKSKSGEKITKKELDQ
LDSKSKSKSKSPSPLKNKLSHTKDLKNQESESTRVSDMSKRDPRLKKHLQDKTDSKDDDT
KDKRKTAEKKDKDEHMKSSEHRLVGSRNKIINGIVQKQDTITEESEKQGTKPGRSSTRKR
SRSRSPKSRSPIIHSPKRRDRRSPKRRQRSMSPTSTPKAGKIRQSGVKQSHMEEFTPSRE
ERSAKRSTKQDVRDPRRIKKTEEERPQETAGQHSTKSGTEPKENVENWPSSKSTKRWKSG
WEENKSLQQGDEHSKAPHLRHRESWSSTKGILSPRTPKPQHRLSVDANLQIPKELTVASK
RELLQKTSERLASGEITQDEFLVVVHQIRQLFQYQEGKHRCSVRDSPTEENKGGLKKKPL
LSDAELTYYEHKAKLKRTQVQHSFPRLDLLDPDIFDYPLTDALLSGIECEPSKSKHASRN
SGAQFDRKEQFSERARRLSPISGSRTYAENLSPHEGRRRHDEQVSSKGVREEQRSPFNDR
FPLKRPRYEDTDKPFVDSPASRFAGLDTNQRLTALAEDRPLYDGPSRPSVARDGPAKMIF
EGPNKLSPRIDGPPAPGSLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGT
PLRFEGPIGQAGGGGFRFEGSPGLRFEGSAGGLRFEGPGGQPVGGLRFEGHRGQPVGGLR
FEGPHGQPVGGLRFENPRGQPVGGLRFEGGHGPSGAAMRFDGPHGQPSGGIRFEGPLLQQ
GVGMRFEGPHGQSVAGMRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEG
PSVPGGGLRIEGPLGQGGPRFEGCHALRFEGQPGQSSLLPRFDGLHGQPGPRFERTGQPG
PQRFDGPPGQQVQPRFDGVPQRFEGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFNQ
TGPYNDPPGNAFNAPSQGLQFQRHEQMFDSPQGPNFNGPHGPGNQSFSNPLNRASGHYFD
EKNLQSSQFGNFGNLPAPITVGNIQASQQVLTGVSQPVAFGQGQQFLPVHPQNPGAFVQN
PSGVLPKAYPDNHLSQVDVNELFSKLLKTGILKLSQPDSATTQVNEVATQPTAEEEEDQN
EDQDVPDLTNFTIEELKQRYDSVINRLYTGIQCYSCGMRFTTSQTDVYADHLDWHYRQNR
TEKDVSRKVTHRRWYYSLTDWIEFEEIADLEERAKSQFFEKVHEEVVLKTQEAAKEKEFQ
SVPAGPAGAVESCEICQEQFEQYWDEEEEEWHLKNAIRVDGKIYHPSCYEDYQNTSSFDC
TPSPSKTPVENPLNIMLNIVKSELQEPCESPKVKEERIDTPPACTEESIATATEIKTEND
TVESV
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcagacgccggccgaggccggtactgcgggggcccgggaggacgcctgtcgg
gattatcagtcatcactcgaagacctgaccttcaatagcaaaccgcacatcaatatgctg
accattctagccgaggagaacctgcccttcgccaaggagatcgtctctctcatcgaggcc
caaaccgccaaggctccctcctcagagaagcttcctgttatgtaccttatggattctatc
gtgaaaaatgttggaagagagtatctcactgcctttactaaaaatctagttgcaacattt
atttgtgtgtttgaaaaggtggatgaaaatactagaaaaagtttatttaaattacgttcc
acatgggatgaaatatttcctttgaagaaactttatgccctggatgtcagagtcaattca
ttagatcctgcttggcctattaaacctctgccccccaatgtgaatacatctagcatccat
gtgaatcctaagtttttaaataaatcgcctgaagagtcttcaacacctggcacagtggtc
agttcccctagcatctccactcctcctattgttccagatatacaaaagaatcttactcaa
gagcaactaataaggcagcaattactggcaaaacaaaaacagctgttagaacttcagcag
aaaaagctggagcttgaacttgagcaagctaaggcacaactggcagtttctcttagtgtt
cagcaggagacatctaacttaggtcctggatctgcaccatccaaattacatgtttcacag
attccccctatggcagttaaagctccccatcaggttcctgtgcagcctgagaaaagtcgt
ccaggtccatccttacaaattccagatacgaaaggaactaaccgggatccccgtcttaat
aggatgagtcaacattcttctcatggaaaagatcaaagtcacaggaaagaattcctaatg
aacacactgaaccaatctgatattaagacaagtaaaactgtaccctctgaaaaactaaat
tcatccaagcaagaaaaaagtaaatcaggtgaaaaaataaccaagaaagaacttgaccaa
ttggattctaagtccaaatctaaatctaaatcaccgtcacctttgaaaaataaattatcc
cacacaaaagacttgaaaaatcaagaatctgaaagtacaagggtgtctgatatgagcaag
agagatccaagattaaaaaaacatcttcaggataagactgatagcaaagatgatgataca
aaagacaagagaaaaactgcagaaaaaaaggataaagatgagcacatgaaatcatctgaa
cacagactggtgggaagtagaaataaaatcataaatggcattgtacaaaaacaggataca
ataacagaagaatcggaaaaacaggggacaaaaccagggagatcaagtactagaaagcga
tcaagatcacgatcacccaagtctcggtcaccgattatacattctcccaagagaagagac
aggcggtcacccaaacgaaggcaaaggagtatgtctccaacctcaacccccaaagctggg
aagattcgccagtcaggagttaaacagtcacacatggaggagtttacaccttccagggaa
gaaagaagtgcaaagagaagtactaaacaggatgttcgagatccaaggcggataaaaaag
actgaagaggaacgaccacaagagactgcaggtcaacattctaccaagtcaggcactgaa
ccaaaggagaatgtagaaaattggccaagttccaagtctaccaaaagatggaaatccggt
tgggaagaaaataaaagtttacaacagggtgatgaacatagtaaagctcctcatctaagg
catagggagagctggtcaagcactaaaggaatcttgtcacctcgaacccccaagccgcag
catcgattaagtgtagatgccaatcttcagattcctaaagagttaactgttgcaagcaaa
agagaattacttcaaaagacgagtgaacgtttagcatctggtgaaattacacaggatgag
ttccttgttgttgtgcatcaaatacgacagctatttcagtatcaagaaggtaaacataga
tgcagtgtacgggatagtcctacagaagaaaataaaggtggattaaaaaagaaacctctc
ttatctgatgctgaattaacctactatgaacataaagcaaaactgaaaaggacacaggtt
cagcattcatttccaagacttgatctcttagatcctgatatttttgactaccctttgact
gatgccttgttgtctggaatagaatgtgagccatccaaaagtaaacatgcaagtaggaat
agtggagcacagtttgacagaaaagaacaatttagtgaaagagcaagacgtctttctcct
atatctgggagtcgtacttatgctgagaatctttcaccccatgagggccggagaagacat
gacgagcaagtctcttctaaaggtgtacgagaagagcagagatcaccattcaatgatcgt
tttccacttaaacgacctagatatgaagatacagataaaccatttgtagatagccctgca
tcaagattcgccggccttgatacaaatcaacgacttacggctttagctgaagatagaccg
ttatacgatggacctagcaggccatcagtagcgagagatggcccagccaagatgattttt
gaaggacctaataaattaagccctagaattgatggacctcctgcaccgggttctcttcgg
tttgatgggtcaccaggacagatggggggaggtggccctttgagatttgaaggaccacaa
ggccagttaggaggtgggtgtcctttgagatttgaaggtcctccaggaccagttgggaca
cctctgcgatttgaggggccaattggtcaagcaggaggaggtggcttccgatttgaaggt
tcccctggtctgaggtttgagggatctgcaggtggtttgcgatttgaaggaccagggggc
cagcctgtgggcggtctcaggtttgaaggacatcggggtcaacctgtgggtggtctgagg
tttgagggacctcatggtcagcctgtgggtggacttcgatttgagaatcctcgaggtcag
ccagtaggtggacttagatttgaaggaggtcatggtccatcaggggctgcaatgaggttt
gatggacctcatggtcagccatcaggtgggatcagatttgagggcccattgttacagcag
ggagttggaatgaggtttgagggcccccatggtcagtcagtagctggtatgaggtttgaa
ggacaacataatcagcttggtgggaaccttaggtttgagggtccgcatggtcaaccaggg
gttggcatcaggtttgaaggacctttagtccaacaaggaggtggaatgaggtttgagggt
ccttcggttccaggaggtggcctgagaatcgaaggacctctgggtcaaggtggtccaagg
tttgaaggttgtcatgctttaaggtttgaagggcagccaggtcagtcatcactcctgcca
agatttgatggattacacggtcaaccaggtcctagatttgaaagaactggtcagccaggc
ccacagaggtttgatggacctcccggacagcaggttcaacctagattcgatggtgtgcct
cagagatttgaaggcccacaacaccagcaagcatcaaggtttgatattcctcttggtctt
caaggcacacgatttgacaatcatccttcacagaggcttgaatcagtatctttcaatcag
actggcccatataatgatccacctggcaatgcttttaatgccccatcccaaggactacag
ttccaaagacacgaacaaatgtttgactcacctcaaggaccaaatttcaatggaccacat
ggccctggaaaccagagtttttccaatccccttaacagagcttctggacactattttgat
gagaagaatcttcagagttctcaatttggaaactttggcaatttacctgctccaataaca
gtaggaaatattcaggcatctcagcaggttctgacaggtgtttctcagccagtagcattt
ggccaaggacagcaatttttgccagttcatccacaaaatcctggagcatttgttcagaat
ccttcaggagtcctgcctaaggcttatcctgataatcatctcagtcaggtggatgtaaat
gaattattttcaaaactgctaaaaacaggaattcttaaattgtcccagcctgattcagct
acaacacaagtaaatgaagttgctactcagcccaccgctgaggaggaggaagatcaaaat
gaagatcaagatgttccagatcttaccaattttacaattgaagagttaaaacaacgttat
gatagtgttataaatcgactgtacactggtattcagtgttattcctgtggaatgaggttt
acaacatcacagacagatgtatatgcagaccacttggactggcattatcgacaaaataga
actgaaaaagatgtaagcagaaaagtcactcataggcgttggtactacagtttaacagac
tggatagaatttgaggagatagctgatctggaagaacgtgcaaagagccagttttttgaa
aaggtacacgaagaagttgtactcaaaactcaggaggctgctaaagaaaaggagttccaa
agtgtaccggctggaccagcaggagcagtcgagagttgtgaaatctgtcaagagcaattt
gaacagtactgggatgaagaggaggaggaatggcatttaaaaaatgctattagagtagat
ggaaagatttatcatccatcatgttatgaagattatcaaaatacatcttcatttgattgt
acaccatctcccagcaagacaccagttgaaaatcccttgaacattatgttgaacattgtc
aaaagcgaattgcaggaaccctgtgaaagtcccaaagttaaggaagaacgaattgatact
ccaccagcttgcacagaggaaagcatagcaacagccactgaaattaaaacagaaaatgat
acagtcgagtcagtttaa
DBGET
integrated database retrieval system
