Moschus berezovskii (Chinese forest musk deer): 129551039
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Entry
129551039 CDS
T09065
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 4-like
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
mbez
Moschus berezovskii (Chinese forest musk deer)
Pathway
mbez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129551039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mbez03000
]
129551039
03019 Messenger RNA biogenesis [BR:
mbez03019
]
129551039
04121 Ubiquitin system [BR:
mbez04121
]
129551039
Enzymes [BR:
mbez01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129551039
Transcription factors [BR:
mbez03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
129551039
Messenger RNA biogenesis [BR:
mbez03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129551039
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
129551039
Ubiquitin system [BR:
mbez04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129551039
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-RING_2
zf-C3HC4_2
zf-CCCH_2
Torus
zf-C3HC4
Rcat_RNF216
zf-UDP
Motif
Other DBs
NCBI-GeneID:
129551039
NCBI-ProteinID:
XP_055274759
LinkDB
All DBs
Position
Unknown
AA seq
572 aa
AA seq
DB search
MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEELQRIKNEKKXKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPGASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQELYKLNPSFLQLSTGSVDKNKNKVTPLQSPIDKPSDSLSIGNGDNSQQISNSDTPSPP
PGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFLSSPQTSSD
WPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDYLGFDPFDVTRKALADLIEKEL
SVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAPTNANSLNSTFSVLPQRFPQFQQHR
AVYNLFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNLLDLNLPPQHNTGLGGIPIAG
EEEVKVSTIPLSASSHSLQQGQWPTSLHTTVA
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcagtcctgacgcaaaggaagaccctgtggaatgtcctctttgcatggagccc
ttggagatagatgatatcaactttttcccttgcacctgtggctaccagatttgccgcttt
tgttggcatcgaattcgcactgatgaaaatgggctttgtcctgcatgtagaaagccatat
ccagaagacccagcagtttataaaccactctcccaggaagaactccagaggataaagaat
gagaaaaaanagaaacaaaatgagcgaaaacagaaaatatcagaaaatcgcaaacatttg
gctagtgtacgtgttgtacaaaaaaacctcgtctttgttgtaggtctgtctcagcgccta
gcagacccagaggttttaaaacgaccagaatattttgggaagtttggtaaaatacataaa
gttgtcatcaataatagcacatcatatgcaggctcacagggtccaggtgccagtgcttat
gtaacctatatccggtcggaagatgctctcagagccatacagtgtgttaacaatgtggtg
gttgatggcagaacacttaaggcgtctctaggtacaacaaaatactgcagttacttctta
aagaatatgcagtgtccaaagcctgactgcatgtacctacatgaattgggggacgaggcg
gccagcttcacaaaagaggaaatgcaggcgggtaaacaccaagaatatgaacagaagctc
cttcaggaattatataaattaaaccccagtttccttcaactgtctacgggttcagttgat
aagaataagaacaaagtgacaccactgcagagccctattgacaaaccttctgattctctc
agcatagggaatggtgataattctcagcagatatctaacagtgatacaccttcaccacct
cctggtttatccaaatctaatccagtcatccccatcagttcatccaatcacagtgcacgg
tctccttttgaaggagcagtaactgagtcacagtcgttattctcagataattttcgccat
cccaaccctatcccaagtgggcttcctcctttcctcagctccccacagacttccagtgac
tggcctacagcaccagagccacagagcctcttcacatcagaaacaatcccggtatcatcc
tctacagactggcaagcagcgtttggctttggctcttctaaacaaccagaggattacttg
ggttttgatccctttgatgtcactcgaaaagccttagcagacttgattgaaaaggaactg
tcagtccaagaccagccttccctttcgcccacatctcttcagaactcctcgtcacacact
acaaccgccaaaggtccaggctctggattcctgcatcctgctgcacctacaaatgccaac
tctctgaatagtaccttttccgtcttgccacagaggttccctcaatttcagcagcaccga
gcggtttataatttgttcagttttccaggccaggcagcccgctatccttggatggccttt
ccacgcaatagcatcatgcacttgaaccacacagcaaaccccacctcaaatagtaattta
ttggacttgaatctcccgccacagcacaacacaggtctgggagggatccctatagcaggg
gaagaagaggtgaaggtttcgaccataccactgtcagcctcttcccattcattacaacaa
ggacagtggcctacaagtctccacactactgtggcctga
DBGET
integrated database retrieval system
