Moschus berezovskii (Chinese forest musk deer): 129552245
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Entry
129552245 CDS
T09065
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain
KO
K06823
collagen type XVIII alpha
Organism
mbez
Moschus berezovskii (Chinese forest musk deer)
Pathway
mbez04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mbez00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
129552245 (COL18A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mbez04147
]
129552245 (COL18A1)
00535 Proteoglycans [BR:
mbez00535
]
129552245 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
mbez00536
]
129552245 (COL18A1)
Exosome [BR:
mbez04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129552245 (COL18A1)
Proteoglycans [BR:
mbez00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
129552245 (COL18A1)
Glycosaminoglycan binding proteins [BR:
mbez00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129552245 (COL18A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
DUF959
Collagen_trimer
Fz
Motif
Other DBs
NCBI-GeneID:
129552245
NCBI-ProteinID:
XP_055276447
LinkDB
All DBs
Position
Unknown
AA seq
1936 aa
AA seq
DB search
MAPDPSSRRGHHGLLLLACCLSAAQADLLSWLWSGNSAQPTAAPASKPPSNSPMWPTEDT
TTHVAPRDAPTDWWKVSASPTAPLGRLEEGQGQTPAGPTASTASLDLKEDNIAGVGAKIL
NVAQGIRSFVQLWDDTKDTTPAESSTRAGMPASATPTDSLSTAPAEGSAKAGMLPPTDTT
DLLSTPGPSSTPQNSGTTLQPNTTALSSPDTQKTEAGTLPVPTQPPPSPGRPWFRESLVP
PTPGRFSLSSMPARAPPRGSQLPLGQPLQLDDEGLLLAAARPGQQHPDDRRPTPPLPPLV
TGSLGRHTALWALSSDPPARLSPIAVSALTVDSGAWAPHVANSAGPGLANKSTLLGTAEP
AATGQPVPTTAGRCLPLPPSLALCGHLGIRRSWWPNHLRHASGEEVQAAVPAWGALLQTP
CHRFLAWFFCLLLAPRCGPGLPPGPPPCRQFCEALEDACWSRLDGRGLPLPCASLPARED
GHCVFIGPPAGGRTEPPFQEEAEVWGGREAGSRPEREGHSLLGAMSPLGLHLQHHVAMNH
VSPAPPPVTARNIRMLGLLCPVPAKSTGPGQPCREVSFQEDPSATQKPTSSSCPIVCGCG
GQDPAGLHLWQPGLTGQYQCGDGHQMSSAPTCPPHDTPGSSLPSIVVGASLDSGGGPGGQ
SSMEQTKHRFRHIPSSQPATTSKGFYEFQWFKKTEEEDYFVMQERFSVAQSGWSSRIQCP
QAGSRPNIAAEQQRQRPENSCYLALDAGNKTKEIPEKRCEHSGPPGRKVSRKDTEGLDPV
ASYIGLRSQPRFRTCGRIGLWEQDALQWRPRCGRAEGLISELRLRRDPRVSPRQCQDEDE
DDDDDGASGDLGSGLVETQERLREELGASLGPRLPEAPPVTSPPLAGVGNEEDLRTEEVE
ESTTVSSLGAQTLSSLGTVGSWDESVWNPGSSMKERGLKGQKGEPGAQGPPGPIGPQGPA
GPATDSHEAQPVSGPQGPPGPPGPPGKDGTPGRDGEPGDPGEDGKPGDTGPQGFPGTPGD
VGPKGEKGDPGVGPRGPPGPQGPPGPPGPSFKPDRLTFIDMEGSGFGGDLESLRGPRGFP
GPPGPPGVPGLPGEPGRFGMNSSDVPGPAGLPGVPGRDGLPGLPGPPGPPGTPGKDGQPG
LTGQKGSLGEAGAPGPKGSKGDPGPIGAPGEHGLAGAPGPAGPPGPPGPPGPPGPGFAAG
FDDMEGSGSPFWSTARGADGLQGLPGTPGVKGDPGAVGPPGTKGEVGADGAPGFPGLPGK
EGVAGPQGPKGEKGTQGEKGDPGKDGVGQPGLPGPPGPPGPVVYVSEQDRVLASVPGPEG
RAGFAGFPGPAGPKGELGTKGQQGIPGPKGEKGEPGTFFGPDGRALTPAQKGAKGEPGFR
GPPGPYGRPGHKGEIGFPGRPGRPGMNGLKGEKGEPGDASVGFGMRGPPGPPGPPGPPGL
PGTPVYDSNAFVDSGRPGPPGLPGHQGPSGPKGDKGDVGPPGPPGQFPFDLLQLGAEMKG
EKGDRGAAGQKGERGEPGGGGFFSSGVPGPPGPPGYPGIPGPKGESIRGQPGPPGPQGPP
GIGYEGRQGPPGPPGPPGPPGPPSFPGPYRQTISVPGPPGPPGPPGPPGSMGTSSGGSTG
LGFQQVRVWATYQMLVDQVPQVPEGWLIYVADREELYVRVRNGFRKVLLEAHAPLPRGTD
NEVAVLQPPLVQLHEGNPYPRREAPHPTARSWRADDILASPPRLPHPQPYPGAPHHGAYA
HLRPLPATASPSHTHHDFQPVLHLVALNSPQSGGLRGIRGADFQCFQQARAAGLAGTFRA
FLSSRLQDLYSIVRRADRAALPVVNLRDEVLFPSWEALFSGSEGQLKPGARIFSFDGRDV
LQHPAWPQKSVWHGSDPSGRRLTESYCETWRTDTRAATGQASSLLAGRLLEQKAAGCHNA
FIVLCIENSFMTSSSK
NT seq
5811 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgaccccagcagccgccgcggccaccacggcctcctgctgcttgcctgctgc
ctctcggccgcccaggctgacctgctgtcctggctatggtccggaaacagtgcccagccc
acagccgcgccagcctccaagcccccgagcaactcacctatgtggcctacggaggatacc
accacgcacgtggccccccgggatgctcccaccgactggtggaaagtctctgccagcccc
acagcccctctggggaggctggaggaggggcagggccagacccccgctggccccacggcc
tccactgcaagcctggacctgaaggaagacaacattgccggcgttggagccaagatcctg
aatgtggctcagggcatccggagcttcgtccagctatgggacgacactaaggacaccacc
cctgctgagagctctactagagcagggatgccggcctccgcaactcccacagattccctt
tccaccgccccggccgagggctccgccaaggcagggatgctgccccccacagacaccacg
gacctcctctccacccctggaccctccagcaccccccagaacagcgggaccaccctccag
ccaaatactacggccctgagctctccagacacccagaagaccgaggccggcaccctgcca
gtgcccacccagccgccgccctcccctggcagaccctggttcagggagtccttggtacca
ccgaccccaggtagattttctctttcctccatgccggcccgggcgcctccccggggaagc
caactgcccctcgggcagcccctgcagctggacgatgaaggactcttgcttgcagcagcc
cgtccaggccagcagcaccctgatgaccgcaggcccacaccgcctctacctcccctggtg
acgggttccctgggcaggcacactgccctctgggctctctcctctgacccccctgccagg
ctgtctcccatcgcagtctcagctctaactgtggacagtggtgcttgggctccccacgtg
gctaattctgcggggcccggtcttgctaacaagtccacactgctcgggactgctgagccg
gctgccaccgggcagcctgtccccaccactgctggccgctgcctgcccctgccgccctcc
ttggctctctgcggccacctgggcatcaggcgctcctggtggcccaaccatcttcgccat
gcaagtggggaggaggtgcaggccgcagtcccagcctggggggcgctgctccagaccccc
tgccaccgcttcctcgcctggttcttctgcctgctgctggcaccccgctgtgggcctggc
ctgccgcccggcccaccaccctgtcgccagttctgcgaggccctggaggacgcatgctgg
agccgcctggacgggcgtgggctgccactcccctgcgcctcgctcccagcccgtgaggac
gggcactgcgtgttcatagggccaccagcaggaggccggacagagcctcctttccaggag
gaggcggaggtctggggaggccgagaggcaggctcgagaccagagcgggagggccactcc
ctcctgggggccatgtccccactgggactgcacctccagcaccatgtggccatgaaccac
gtgtcccccgcaccccccccagtcactgctcggaacatccgcatgctgggccttctctgc
cctgtccctgccaagtccacggggccggggcagccctgcagggaggtatccttccaggag
gaccccagtgccacccaaaagcccacctcctcttcctgccccatagtgtgtgggtgtggg
ggccaggaccctgctggcctgcatttgtggcagcctggcctcacgggacagtatcagtgt
ggggacggtcaccagatgtccagtgccccgacctgccctccacacgacactcctggcagc
tcactgccctccatagtggttggagcatctctggattcagggggcgggccgggaggacaa
tcctccatggagcagaccaaacaccgcttccgccacatcccctcctcacagccagccacg
acctcaaaaggcttttacgagttccagtggttcaaaaaaaccgaagaagaagactacttt
gtgatgcaggaacgtttcagtgtcgcgcagtctggttggagcagccgcatccagtgtcca
caggctggttcacgtcccaacatagccgcagagcagcagcgacaaagacctgaaaacagc
tgctatctggcccttgacgcaggaaataaaacaaaagaaataccagaaaaacgttgtgaa
cactcaggacctccaggcaggaaagtttctagaaaggacactgaaggcctggatcctgtg
gcctcgtacataggcctgagatctcaaccacgattcagaacctgcggtcgcattggcctc
tgggagcaggacgccttgcagtggaggccccggtgtggccgggctgagggtctgatctca
gagctgaggttgcgcagggatcctcgggtgagcccccggcagtgtcaggacgaggacgag
gatgacgatgatgatggggcgtctggagacctgggcagtgggctcgtggagacccaggag
cgtctccgggaggagttgggcgcatccctggggcccaggctccccgaggctcctccagtc
acttctccacccttggccggagtcggcaatgaggaggatttgagaactgaggaagtagag
gagtcaaccacggtgtcttcgttaggagctcagaccctctccagcttgggcacagtcggc
tcgtgggacgagagtgtttggaaccctgggagcagcatgaaagagcgaggcctgaagggg
cagaagggagagcctggcgctcagggcccccccggccccatcggcccccagggtcctgca
ggcccagccacagacagccatgaggcacagcctgtttccggaccacagggaccccctggg
cccccgggacccccaggaaaggacggcacccctggaagggacggtgaacccggtgatcct
ggtgaagatgggaagcccggggacactgggccacagggcttcccaggaaccccaggagat
gtgggccccaagggcgagaagggggatcctggagttggaccaaggggacccccaggaccc
caggggcctccggggcccccagggccctccttcaaacccgacaggctgaccttcatcgac
atggagggatccggttttggcggcgacctggagagcctccgtggccctcgcggcttcccc
ggccccccgggaccccctggcgttccaggcctgccaggagagccaggccgcttcgggatg
aacagctcggacgtccctggacccgcaggcctgcccggcgtgcctgggagggatgggctg
cctgggcttccagggcccccgggacccccaggtactccaggaaaagacggacaaccagga
ctgactggacagaaaggcagcctcggcgaggcgggcgccccaggacccaagggaagcaag
ggagaccctggccccatcggcgctcctggggagcatggcctggcaggagcccccggacct
gcaggcccgccagggccccctggcccccccgggcccccaggcccaggattcgccgcaggg
tttgacgacatggaaggctctgggagccctttctggtcaacagcccgaggtgctgacggg
ctgcagggactgcctggcacgcccggagtcaagggggatcctggagctgtggggccacca
ggaaccaagggagaagttggagcagacggagcacctggcttccccggcctcccaggcaaa
gagggtgtagctggaccccagggaccaaaaggagaaaaagggactcagggagagaaagga
gacccagggaaggatggagtggggcagccaggactcccaggaccccctggacccccaggg
cctgtcgtctacgtgtcggagcaggacagagtgctggcgagtgtgccaggtcccgagggc
cgtgcgggcttcgctggcttccccggaccagccgggccaaagggagaactgggcaccaaa
ggccagcagggcatcccgggacccaagggtgagaaaggagagccgggcacgttctttggc
cccgatggcagagcactgacccctgcccagaaaggagccaagggtgagcccggcttccga
ggacccccgggtccatacgggcggcccgggcacaaaggagagattggatttcctggacgg
ccggggcgtcccgggatgaatggactgaaaggagagaagggggagccaggggacgccagc
gtgggattcggcatgaggggtccacctggcccacctgggcctccggggcccccaggcctt
cccggaactcctgtctacgacagcaatgcatttgtggactctggccgccctggaccccca
ggattgccagggcaccaggggccttctggacccaagggtgacaaaggagacgtgggcccg
cccggaccaccagggcagttcccgttcgacctcctccagctgggtgccgagatgaagggg
gagaagggggaccgaggggccgctgggcagaaaggagaaaggggtgagcccgggggcgga
ggattcttcagctccggtgtgcctggcccccccggcccgcccggctacccggggattccg
ggccccaagggagagagcatccgcggccaacccggccctccgggacctcagggacctcct
ggcattggctacgagggacgccaggggcctcctgggccccccggacccccagggcccccg
ggacccccttcctttcctggcccctacaggcagaccatcagtgttcctggcccgccaggc
ccacctgggcccccagggccccctggatccatgggcacttcttcagggggatccactggg
ctgggcttccagcaggtgagggtctgggccacgtaccagatgctggtggaccaggtgccg
caggtgccagagggctggctcatctacgtggcggacagggaggagttgtatgtccgggtc
cggaatgggttccggaaggttctgctggaggcccacgcacccctcccccgtgggacggac
aacgaggtggccgtcttgcagcccccgctggtgcagctgcatgagggtaatccctaccca
cgccgggaggccccccacccgacagcgcggtcctggcgggcggacgacatcctggccagc
cccccgcgcctgccgcacccccagccctaccccggcgccccgcaccacggagcctacgcg
cacctccggccgctgcccgccacggcctcgccctcccacacccaccacgacttccagccg
gtgctacacctggtggcgctcaacagcccgcagtcaggcggcctgcgtggcatccgcggc
gccgacttccagtgcttccagcaggcgcgcgccgcggggctggccggcaccttccgcgcc
ttcctgtcctcgcggttgcaggacctgtacagcatcgtgcgccgagccgaccgcgccgcc
ctgcccgtcgtcaacctcagggacgaggtgttgtttcctagctgggaagccttgttctca
ggctccgagggccagctgaagcctggcgcccgcatcttctccttcgatggcagagatgtc
ctccagcatcctgcctggccccagaagagcgtgtggcatggctcagaccccagcgggcgc
cggctgaccgagagctactgtgagacatggcggacggacaccagggcggccacgggtcag
gcctcctcgctgctggcgggccggctgctggagcagaaagccgctgggtgccacaacgcc
ttcatcgtcctctgcatcgagaacagcttcatgacctcctcctccaagtag
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