Moschus berezovskii (Chinese forest musk deer): 129555385
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Entry
129555385 CDS
T09065
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog isoform X1
KO
K14792
rRNA biogenesis protein RRP5
Organism
mbez
Moschus berezovskii (Chinese forest musk deer)
Brite
KEGG Orthology (KO) [BR:
mbez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mbez03009
]
129555385 (PDCD11)
Ribosome biogenesis [BR:
mbez03009
]
Eukaryotic type
90S particles
Other 90S particles
129555385 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP5
S1
HAT_PRP39_N
Spt6_S1
HAT_Syf1_CNRKL1_N
OB_RRP5
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
Suf
TPR_14
OB_RRP5_4th
TPR_19
TPR_16
TPR_12
TPR_CcmH_CycH
ARM_TT21
UTP6_C
TPR_6
ARM_TT21_5th
TPR_15
DUF7017
DUF2110
TPR_9
ARM_TT21_C
DUF4666
BTAD
Motif
Other DBs
NCBI-GeneID:
129555385
NCBI-ProteinID:
XP_055280710
LinkDB
All DBs
Position
Unknown
AA seq
1874 aa
AA seq
DB search
MAAMEESFPRGGTRKTHKSEKAFQQSVEQDNLFDISTEEESTKRKKTQKGPAKAKKLKVE
TRESSKFVREKFEILNVESLCEGMRILGCVKEVNELELVISLPNGLQGCVQVTEICDAYT
EKLNEQVAQEEPLQDLVSLPELFSPGMLVRCVVSSLDTTKGGKKNVTLSLNPKNVNKVLS
AETLKPGMLLTGTVSSLEDHGYIVDIGVSGARAFLPLQKAQEYIRQKNKGAKLKVGQYLN
CLIEEVKGSGGVVTLSIGHAEISAAIATEEQSWTLNSLLPGLVVKAQVQKVTPLGLTLKF
LSFFSGLVDFMHLDPKKAGTYFSNQQVRACVLCVHPRTRAVRLSLRPVFLQPGRPLTRLL
CQQLGAVLDDVPVQGFFGNAGATFKLKDGALAYARRNHLSNSKKTFKPEAFKPGNTHKCR
IIDYSQMDELALLSLRTSIIEAQFLWYHDIKPGALVKGKVLTIKPHGMVVKMGKQIRGLV
PTMHLADILLKNPEKKYHVADEVKCRVLLCDPKAKKLMMTLKKTLVESKLPAITCYDDAK
PGLQTHGFILRVKDYGCIVKFYNDVQGLVPRHELSAEYVPDPESVFYTGQVVKVVVLNCE
PSKERMLLSFRLSSDLKQECEGQSQKKKKAVSAGQLVDVKVLEKTKDGLKVAVLPHNIPG
FLPTAHLSDHVTNGPLLHHWLQTGDTLHRVLCLSTSEERVLLCRKPALVSAVEGGQNPKS
FSEIHPGMLLIGFVKNIKDYGVFVQFPSGLSGLAPKAVLSDKFVTSTSDHFVEGQTVVAK
VTNVDEEKQRMLLSLRLSDCTLGDLATTSVLLLSQCLEEWQGVRSLMSNRDSVLIQTLAE
MTPGMALDLEVQEVLEDGSVLFSEGPVPGLVLRASRYHRAGQDVEPGQKKKAVILNVDML
KLEVHVSLCHDLVNRKAKKLKKGSDLQAVVQHLEESFAVASLVETGHLAAFSLTSHLNDT
FRFDSEKLQVGQGVSLTLQTTEPGVTGLLLAVEGPAAKRTMRQTRKDSETVDEDEEVDPV
LVVGTVKKHTLSIGDMVTGTVKSIKPTHVVVTLEDGIIGCIHASHILDDVPVGISPTAKL
KVGKKVTARVIGGRDMKTFKFLPISHPRFIRTIPELSVRPSELKEDGHTALNTHSVSPLE
KIKQYQAGQTVTCFLKKYNMVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKKFQIGQ
ALKATVVGPADSSKAFLCLSLIGPHKLKKGEVAMGRVVKVTPREGLTVSFPFGRIGRVSM
FHVSDSYSETHLEDFAPQQIVRCYVLSAASPVLTLSLRSSRTNPETKSKITDPEINSIQD
LEEGQLLRGFVKSVQPSGVFVGLGPSVMGLAQYPHVSQHNQSKKAPYDRHLPEGKLLTAK
VLRLNHRESLVELSLLPDDTGKQDVLSASLGQPPPKQEGRETEAAERDHEGKAKEKKQQK
QKEKRNGQGQEGVQPPSKAKKEPQKPQAKKLDKRPHPESSSEQEIGNKKQKKAALSEEDD
SGVEVYYREGEEEEETSVLPKEKLTRPAEAPRLQLSSGFVWDVGLDTLTPALPPHRESSD
SEEDEKPEQATQKKKSKKERELEKQKAEKELSRIEEALMDPGRQPESAEDFDRLVLSSPS
SSLLWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESL
TKVFERAVQYNEPLKVFLHLADIYTKSEKFQEAGELYNRMLKRFRQEKAVWVKYGAFLLR
RGKAEASHRVMQRALECLPKKEHVDLIAKFAQLEFQLGDAERARAMFERTLSIYPKRTDV
WSVYIDMTIKHGSQKEARDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGSEKDVQAVKAK
ALEYVEAKSSMMDD
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atggcagccatggaagaaagcttcccccgtgggggtacaagaaagacccacaaatcagag
aaagctttccagcaatcagttgaacaagacaacttatttgatatttctactgaagaggaa
tctaccaaaaggaaaaagacccagaaagggccagcaaaagcaaaaaagttgaaagttgaa
accagagaaagcagcaagtttgtcagagagaagtttgaaatccttaatgtggagtccctg
tgtgaggggatgcggattttgggttgtgtgaaagaggtaaatgaactggaactggtgatt
agtctccccaacggcctccaagggtgtgtgcaggtgactgaaatctgtgatgcttacact
gaaaagctgaatgaacaggtggcacaagaagaacccctgcaggacctcgtcagcttgcct
gagctcttctcacctggaatgctggtgagatgtgtggtgagcagtctggataccacaaag
gggggcaaaaagaatgtcacgctatctctgaaccccaaaaatgtcaacaaagtgctgagt
gctgagaccctgaaacctggcatgctgctcacgggcactgtgtccagcctggaagaccat
ggctacatagtggacattggtgttagtggggccagagcttttctgccactgcagaaagcc
caggagtacattcggcagaagaacaaaggtgctaaactgaaggtgggtcagtacctgaac
tgcctcattgaagaggtgaagggcagtggaggagttgtcactctgtctattggtcatgca
gaaatttctgctgccattgctactgaggaacagagttggaccctcaatagtttgctacca
ggactggtggtcaaagcgcaggtacagaaggtgactccacttggccttacgcttaagttc
ctctcattcttcagtggcctggttgactttatgcacctggatcctaagaaagccggaaca
tatttctcaaatcagcaagtacgggcctgtgtcctctgcgtgcatcctcggaccagagct
gtgcggctgagcctgcgtcccgtcttcctgcagcccgggcgcccactcacccggctcttg
tgccagcagctaggagctgtgctggatgatgtgcccgtccagggcttttttggcaatgct
ggggccacctttaagctgaaggatggtgctctggcctatgctcggcgcaaccatctctcc
aattctaagaaaactttcaaacctgaggccttcaagccagggaacactcacaagtgtaga
atcatcgactacagccaaatggatgaactggccttgctctctctgcggacgtctattatt
gaagctcagttcctttggtatcatgacataaaacctggggctttggttaagggcaaagtg
ctgaccataaagccacacggaatggtggtgaaaatgggcaagcagatcaggggcctggta
cctaccatgcatctggctgacatccttctaaagaatccggagaagaaataccacgttgcg
gatgaggtcaagtgccgggttttgctttgtgaccctaaagccaagaagctcatgatgacc
ctgaagaaaaccctggttgagtccaaacttcctgccattacctgctatgatgatgccaag
cctggtctgcagactcacggctttatcctccgggtcaaggactacggctgcatcgtgaag
ttctacaatgatgtgcagggactggtgcccaggcacgagctcagtgccgagtacgtccct
gacccagagagtgtcttttacaccggccaggtggtgaaggttgtggtgctgaactgtgag
ccgtccaaagagaggatgctcttgtccttcaggctgtcgagtgatctgaagcaagagtgt
gaaggacagagtcagaagaaaaagaaagccgttagtgctgggcagttggtggatgtgaag
gttttagagaagaccaaagatgggctgaaggtggctgtcctgccccacaacatccccggc
ttcctcccgacagctcatctgtcggaccatgtcaccaatggcccactgctgcatcactgg
ctccagacaggcgacaccctgcaccgggtcctgtgtctgagcacgagtgaggaacgggtt
ctcctttgcaggaagccagccttggtctctgcagtagagggtggccagaatcccaagagc
ttctcagaaatccatcccggaatgctgctcattggttttgtgaagaacatcaaggactac
ggtgtgttcgtccagttcccctcaggtcttagtggactggctcccaaagctgtcttgagt
gacaagtttgtgacctccacaagtgaccactttgtcgaggggcagacggtggttgcgaag
gtgaccaacgtggacgaggagaagcagcggatgctgctgtcactgcggctgtcagactgc
accctgggggacctggccacaaccagcgtcctcctcctgagccagtgcctggaggagtgg
cagggcgtccggagcctcatgagcaaccgagactctgtgttgatccagactttggctgaa
atgaccccgggcatggcccttgacctggaggtgcaggaggtgttggaagacggctctgtg
ctgttcagtgagggccctgtgcctggcctggtcctgcgagccagcaggtatcatcgggca
gggcaggacgtggaacctgggcagaaaaagaaggctgtaatcttaaacgttgatatgttg
aagttggaagtacatgtttccctctgccacgatttggtgaatagaaaagctaaaaagctg
aagaaaggcagtgacctccaggccgttgtgcagcacttggaggagtcgtttgccgtcgcc
tccttggtagagactggccacctcgcagctttctccctgacctctcacctgaacgacacc
ttccgctttgactcagagaaattgcaggtggggcaaggcgtctccctaaccctccagacc
acagaaccaggagtgaccggtctccttttagccgttgaggggccagctgctaagaggacc
atgagacagacccggaaggactcagagacagtcgacgaggatgaggaagtggatccagtt
ctggtcgtagggactgtgaagaagcacaccctgtccattggggacatggtcacagggact
gtcaagtccattaagcctacccatgtggttgtgaccctggaagatggcatcattggctgc
atccatgcctcccacattctcgatgatgttccagtgggcatatctcctactgccaagctg
aaagttgggaagaaagtcactgcccgagtgattggcgggagagacatgaagaccttcaag
tttctcccaataagtcatcccagatttattcgaaccatcccagagctgagtgttcggcca
agtgagctgaaggaggatggccatactgctctcaacactcactctgtaagccccttggag
aagattaaacagtatcaggctggtcagactgtgacctgcttcttgaagaagtacaacatg
gttaagaaatggctcgaggtggaaattgctccagacatccgagggagaattcccttgttg
ctcacttctcttagcttcaaggttctgaaacatccagataagaagttccagattggccag
gccctgaaggccactgtggttggcccagcagattcctccaaggccttcttgtgtctttca
ctcataggtcctcacaagctcaagaagggggaagtggccatgggccgtgtggtaaaggtg
actcctagggaggggctgaccgtctccttccccttcgggaggattggaagagtcagtatg
tttcatgtgagtgattcctactcagagacgcacctggaagacttcgccccacagcagatt
gttaggtgttacgtcctgtccgctgcgagccctgtattgactttgtcactgagatcgtcc
aggacgaacccagagacgaaaagcaaaataacagatccagagattaactccatccaggac
cttgaggaagggcagctcctgaggggcttcgtgaagtccgtccagccgtccggcgtgttc
gtaggccttggcccctcagttatgggtttggcccaatacccgcacgtctcccagcacaac
cagtccaagaaggctccttatgacagacacctccctgaggggaagctgctcacagccaag
gtcctacgcctgaaccatcgggagagcctggtggagctgtcactcctccccgacgacact
ggaaagcaggacgtgctttctgcctccctgggacagccacctccaaagcaagaggggagg
gaaacggaggcagcggagagagaccacgaaggaaaagcaaaagagaagaagcagcaaaaa
cagaaagagaagagaaatgggcaggggcaggagggggtgcagccacccagcaaggctaag
aaagagccccagaagccccaggcaaagaagctggacaagcggccgcaccccgagtccagc
agtgagcaggaaatcgggaacaagaagcagaagaaagctgccctgtccgaggaggacgac
agtggtgtggaagtgtattaccgagaaggagaagaggaagaagagacgagcgtgttgccc
aaggagaagctgaccaggcctgcagaagcgccccggctgcagctgtcttcgggcttcgtt
tgggatgtgggtctggacaccctgaccccagcgttgccacctcacagagagagctcggac
agcgaggaggatgagaagccagagcaagccacgcagaagaagaaaagcaagaaggagagg
gagctggagaagcagaaggcagagaaggagctgtcccgcatcgaggaggcgctgatggat
cctgggcgacagccggagtcggccgaggacttcgaccgactggtgctgagctcacccagc
agctccctcctgtggctgcagtacatggccttccacctgcaggccacggagatcgagaag
gcccgggccgtggccgagagggcgctcaagaccatctccttcagagaggagcaggagaag
ctgaatgtgtgggtggccctgctgaacctagaaaacatgtatggctcccaggagtcactg
accaaggtcttcgagcgggccgtgcagtacaacgagcctctcaaggtctttctccatctg
gctgacatttacaccaagtcagagaaattccaggaagctggcgaactctacaaccggatg
ctgaagcgtttcaggcaggagaaagctgtctgggtcaaatacggcgccttccttctgcgg
aggggaaaggcggaggccagtcaccgtgtgatgcagcgagccctcgagtgcctgcctaag
aaagagcacgtggatctgatcgccaagtttgcccagcttgagttccagctgggggatgca
gaacgcgccagagccatgtttgagaggacactgagcatctacccaaagcgcacagatgtc
tggtcggtttacatcgacatgaccatcaagcatggcagccagaaggaagcccgggacatc
ttcgagcgggtcattcacctgagcctggcccccaagcgaatgaaattcttcttcaagcgc
tacctggactatgagaagcaacacggctcggagaaggatgtgcaggcagtaaaggcaaag
gccctggaatacgtggaggccaagagctccatgatggacgactag
DBGET
integrated database retrieval system
