Moschus berezovskii (Chinese forest musk deer): 129555762
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Entry
129555762 CDS
T09065
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain isoform X1
KO
K16617
collagen type XIII alpha
Organism
mbez
Moschus berezovskii (Chinese forest musk deer)
Pathway
mbez04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mbez00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
129555762 (COL13A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mbez00536
]
129555762 (COL13A1)
Glycosaminoglycan binding proteins [BR:
mbez00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129555762 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
129555762
NCBI-ProteinID:
XP_055281536
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MEAPLTEAPGDPEDIPRMSLPARVLLEDPASRGTKVPLGCLDVWEERANQARSFSFLFFP
SPPPLSFSPQQGAPGDAGMSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGRPGPKGEMGP
QGQKGEKGQCGEYPHREHLSGSLAALRSNQIITLKGEQGQAGIQGPPGPPGPPGPSGPLG
HPGLPGPMGPPGLPGPPGPKGDSGIQGYHGRKGERGMPGMPGKHGAKGEPGIPGAKGEKG
AAGSPGPLGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGADGQAGPPGRQGD
KGEPGAAGEQGPTGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPG
APGIPGEKGEIGLPGPPGLDGEKGPRGKPGDVGPPGPQGPPGKPGPAGMKGEDGFPGSPG
EKGEKGETGQPGPPGLDGPTGEKGEPGDQGRPGATGLPGPIGLPGFIGEKGEPGEKGDPG
MEVPGPPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGVQGEKGDRGPLGLPGASGLDGR
PGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGS
RGPKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNK
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggaagctccactcacggaggcgccgggagaccctgaagacatccccaggatgtcactg
cccgccagggtcctgctggaagacccggcctcccgggggacaaaggtgccattgggatgc
ctggacgtgtgggaggaaagggccaaccaggcgagaagcttctcctttctattcttcccc
tctccccctcctctctctttctctccccaacagggcgccccaggagatgccggcatgtcc
atcattggtccccgcggccctcctggtcagccgggcacccgaggtttcccaggatttccg
ggtcccattgggctcgacggcaaaccgggccggccgggaccaaagggggagatgggacct
caaggacaaaagggagaaaagggtcagtgtggcgagtacccgcaccgggagcacctaagc
ggctctctagcagctctgcgctccaaccagataattactctgaagggtgaacagggccag
gctggcatccaaggcccaccagggccaccaggccctcccggaccgagtggacctctgggg
cacccaggactgccagggcccatgggcccacccggcttacctgggcctcctggaccaaag
ggagactcggggatccagggctaccacggccggaagggagaacggggcatgccagggatg
ccgggcaaacacggagcaaagggtgaacctgggatcccaggagccaagggtgagaagggg
gctgcggggtcccccgggccactcggcctcttggggcagaagggagaaaaaggcgatgct
ggcaactccattggaggaggcagaggggagcctggtcccccagggcttcctggacccccg
gggccaaagggggaagctggagcagatggccaggcaggccccccaggacggcaaggagac
aagggggagcctggagcagctggagaacagggacctactggccccaagggctccaagggg
gaacctgggaaaggagagatggtagactacaacggtaacatcaacgaggctctccaggag
atccggacactggccttgatggggccccctggtcttcctgggcagatcggcccacccggt
gctccagggatcccaggcgagaagggggagattggactaccaggccctcccggactcgat
ggggaaaagggacctcgaggcaaaccaggagatgtgggccctcctggcccccaaggcccc
ccaggaaagcctgggcctgcaggcatgaagggagaagacggcttcccggggagcccaggc
gagaagggggagaaaggggagacggggcagccaggaccaccgggtctagacggcccaact
ggggagaaaggagaacccggtgaccaagggagacccggagcgactggacttcctggccca
atcgggctcccaggatttataggggagaaaggagaaccaggggagaagggcgacccagga
atggaggttcctgggccaccagggccagaggggcctcctggacctccggggctccaaggc
gttcctggaccaaagggggaagcaggactagatggagcaaaaggagagaagggcgtccag
ggagaaaaaggagaccgaggtcctctgggattacccggagcttcaggtttggacggcagg
cctgggccaccgggtactccaggaccaatcggagttccaggcccagcgggaccaaaggga
gagaggggcagcaaaggcgaccctgggatgacgggaccaacgggagcagctgggcttcct
ggtttacacggaccacccggggacaaagggaaccggggggagagggggaagaaaggctct
agagggcctaagggggataagggagaccaaggagcgcctggattagatgccccctgtcca
ttgggtgaagatggcttgccagtccagggctgctggaacaagtga
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