Moschus berezovskii (Chinese forest musk deer): 129556540
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Entry
129556540 CDS
T09065
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
mbez
Moschus berezovskii (Chinese forest musk deer)
Pathway
mbez03013
Nucleocytoplasmic transport
mbez03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mbez00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129556540 (UPF3A)
03015 mRNA surveillance pathway
129556540 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbez03019
]
129556540 (UPF3A)
Messenger RNA biogenesis [BR:
mbez03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
129556540 (UPF3A)
mRNA cycle factors
P-body specific factors
129556540 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
129556540
NCBI-ProteinID:
XP_055282746
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MRSEDGAGGPVVAVATRGPSGREKPSSAESQFRRESPRREVEAPLAPSSGCGSGAGKPRE
EKRTVLSKVVIRRLPPSLTKEQLEQQLHPLPAHDYFEFFTADVSLDPHLYSRAYINFRNP
DDILLFRDRFDGYVFIDSKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIEDDPEYKKFL
ETYCVEEEKTSASPETLLGDIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRR
RELEKKRLREEEKRRRREEEKCRRKAAEKQKKTAEMEVRMKNVSSVMTRGEEGVSLMQTL
CLQLLKKTEKGEERSTEKPKERAEEIDPGDGKWEPCPSGAVLKPKPSEGLLEELQERSQN
DSDKEQRGKERRSRDKELEAQRCRLDDSRRHRAHCELEECSGRSGEELAWGKGLVADRGR
KGSQDGGCPVEAAERLGREKSEDRPAPRKERSGNKDRPGLQLYQPRARIRARDCDGRHLE
EGRDGRRGEAEDSTVALAEKSEEVVWGDMHVGDVVGGPPPQHSVDSRGRSFRKCIN
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcggaggatggagccgggggccccgttgtggccgttgctacgcggggtccgagc
gggagggagaaaccatcatccgcagaaagccagttccgccgggagtctccgcggcgggag
gtcgaagcgccgctggccccctcctccggctgtgggagcggcgcaggcaaacctcgcgag
gaaaagaggacggtcttgagcaaagtggtcatccggcggcttccccccagcctcaccaag
gagcagctggaacagcagctgcacccgctgcctgcacacgattacttcgagttctttact
gctgatgtcagtcttgacccccatctctactcaagagcatacattaactttagaaatcca
gatgacatccttctgtttagagatcgttttgatggatatgtcttcattgatagtaaaggg
ctggaatatcctgcagtggtagaatttgctccattccagaagatagccaaaaagaagcta
aagaaaaaagatgccaaaaccgggagcattgaagacgacccagagtataagaaattttta
gaaacttactgtgtggaggaggagaaaactagtgccagtcctgaaactcttctgggagac
atagaggcaaagacacgagaacttattgctagaagaaccacacctctcttggaatatatt
aaaaacagaaaattagagaagcagcgaattcgagaagaaaagcgagaggagcggaggagg
agggagctggaaaagaagcggctacgggaagaagagaagcggaggcggcgggaggaggag
aagtgcaggaggaaagcagcagaaaaacagaagaaaacggcagagatggaagtaaggatg
aagaatgtcagctctgtcatgaccagaggggaggaaggtgtatccctaatgcagacctta
tgcttgcagcttctcaaaaaaacagaaaagggagaggagcggagcactgagaaaccaaaa
gaaagagcggaggagattgaccctggagacgggaagtgggagccctgtcccagcggggcg
gtcctgaagcccaagccctcggagggcttgctggaggagctccaggagaggtcacaaaac
gacagtgataaagagcaaaggggtaaggagagaagatcccgagacaaagaacttgaagca
cagcgatgccgcttggatgacagcaggagacacagagcccactgtgagctggaagaatgt
tcgggaagaagcggagaggagctggcctgggggaaaggattggtcgcagacagagggcgg
aaaggaagccaggatgggggctgccctgtggaagcggctgagaggctggggagggagaag
agtgaagaccggccggcacccagaaaggagcgctcgggaaacaaggaccggccaggcttg
cagttgtaccagcccagagctcgcatccgagcccgtgactgtgatggaagacatcttgag
gagggccgcgacgggaggaggggtgaggcggaagactcaactgtggctttagctgagaag
agtgaagaggtggtgtggggcgacatgcatgttggtgatgtggttgggggccccccacct
caacactctgtggattcaagaggccgttccttccggaagtgtataaattag
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