Moschus berezovskii (Chinese forest musk deer): 129557430
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Entry
129557430 CDS
T09065
Symbol
DDX60
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX60
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
mbez
Moschus berezovskii (Chinese forest musk deer)
Brite
KEGG Orthology (KO) [BR:
mbez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbez03019
]
129557430 (DDX60)
Enzymes [BR:
mbez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129557430 (DDX60)
Messenger RNA biogenesis [BR:
mbez03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
129557430 (DDX60)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN-like_DDX60
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
129557430
NCBI-ProteinID:
XP_055283931
LinkDB
All DBs
Position
Unknown
AA seq
1258 aa
AA seq
DB search
MRVTYDWEVGIFRTPYTYDRGSYSKAPQEPHLAPRAAARSGVEDGDVGAHGLVRRREATG
RKGGGGEQGRARPPDPLGGAGRGWGGGARPEAAGLAAPPRGVLTPACSRLLSLPRFTGNQ
NKAALWGQKRKENAARWKASEAGAARGVDGGRVRARLRASGRLCPLCSPFCGKQTLLRVP
PLSAISASSLGAPAPLADHAVFFRKMTKLTXSEIAKTRYSSLLNGFVGLTVFVIDGDSLL
VTCLFMPSWWFGQDLYVFYLLECCLMNLISXGGQFAIAFFKITCNTCMFQLPELLALRTA
LVLHLQHNTNTNVQTTFSGCLSREWITFLEGSCPYFLIIADEGLSHLQIHLFNFLILXSW
SMKVNAVLFSGQSSDILRFYVYFMQSKYKNQMFFREATKDLSIAVQMVKTICSVKEKYPE
LLQEQXQQLIARCLQCLGFKELASFLKGHKGEENGQIFTVGLGPVWFRVQYMGHYLVCDE
RKYAEPRVQDFIPENWPQELLDIVDKTESEVVTAPKSSGKTYASYYCMERVLHEGSEGVV
VYVAPARALLNXVAATIENRFNKNLPNGEGLCGVFTWDYCRDVLNSQCSCLWVLITVPAC
FEILLLALHRQSWVKRIRCIIFAEVNCLGGEIGAEIWEHLLIIIRCPFLALSVTISNLEH
LTEWLQSVKLYWKQADSMIEKKYCFYKKCQRPCPFPQNYLLMTQSYKVRLLLCEERCSDL
EKYVWSVRNHDISFDQFHLCAVLTMDHIEKFGFPSNLTLSLXEMVQLYDTMFEFWKSRLR
AQELYPEEFTHFENKRVIRKMDARKYEESLKAELTSWVRKGHTSEVILTRVLDETSLRSQ
NMAIMFPLLVEKLREMGKLPALFFLRAFFSSVSKFDFGAVERRAESVKKFLQQKPERRRP
PRADKEAHDMANKLRKVKKSTEKSKTVCSFRAAAGILPEARPPLPPPLLGLVPFSQAHAA
LQYLSKLGFAADAPCACLPLAVLEKNLDIPWDCTKANQKAIDAEVSPGGTVLGEVTPHAP
SYYCICTALGVALSAHLSRAELPEHTLLAAPEPRAFRACMVTATSTLTLGVNMPCKSVVF
TEDSFFFFLDALNFXQMSGCADKRGEDLTGSVSFYNISLPKIEGLLRSNVPKLKGQFPLS
LCLVLRHMLLFAXADANTKASSVLQHSLMSFKQPNIKHMLKFYFIYSLQFLLVETGFQGF
LDQECVPIGYSGLVSPLHYHEPSNFVLVSLLVKGLFLKWCVPTNIKGKQRCISHTPTH
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgacctacgactgggaggtgggcatcttcaggaccccctacacctacgacagg
ggcagctactctaaggcacctcaagagccccatctcgctccgagggcagctgcccgctcc
ggggtggaggatggcgacgtcggagcgcatggcttggtcaggcgccgggaggccacaggg
aggaagggcggcggaggggaacagggccgggcacggcccccggaccccctgggcggcgcc
gggcgaggctggggcggcggggcgcgcccagaggccgcggggctcgctgcgccgccgcgc
ggagtgctcacaccggcctgcagtcgcctcctgtctctccctcgctttaccgggaatcaa
aataaagcggctttatgggggcaaaagcggaaagaaaacgcagctcgctggaaagccagc
gaagcgggcgctgcccgcggcgtggacggcgggcgagtccgggcgaggctccgcgcgtct
gggcgtctctgcccgctctgctcccctttctgcggcaagcagacgctcctcagggtccct
ccgctttccgccatctccgcgtcttcccttggggcccccgccccgttagcagatcatgca
gtatttttcaggaaaatgacaaaattaacatagagtgaaatagcaaaaactagatattcc
agtttactaaatggttttgttggattaaccgtttttgtgattgatggagactccttgctt
gtcacatgcctattcatgccctcgtggtggtttggacaagacctgtacgtcttctacctg
cttgaatgctgcctcatgaatctaattagctaaggaggacagtttgccattgctttcttc
aagataacatgcaacacatgcatgtttcaacttccagaacttcttgctctgagaacggca
ttagtcctccatcttcagcataataccaacactaatgttcaaacaaccttttctgggtgc
ttatcacgagagtggatcactttcctggaaggcagttgtccgtattttctgattattgct
gatgagggcctgagccatctacagatacaccttttcaactttttaatcctttagtcttgg
tcaatgaaggtcaatgctgtgctcttctctggccagtcatctgatatccttcgattttat
gtgtactttatgcagagcaagtacaaaaaccagatgtttttccgtgaagccactaaagac
ttaagtatagctgtgcagatggtgaaaacaatctgctctgtgaaggaaaaatatccagag
cttctgcaggagcagnatcagcagctcatagccaggtgcctgcagtgtttagggttcaag
gagctggcgagttttttgaaagggcataaaggagaagaaaacggacaaatattcacagtg
ggccttggaccagtctggtttcgggtgcagtacatgggccactatctggtgtgtgatgag
aggaagtatgcagagcccagagttcaggactttattcctgaaaactggcctcaggagctc
ctggacatcgtagataagactgagtctgaggtcgtcacggcccccaagtcctcagggaag
acctatgcctcctactactgcatggagagggtgctgcatgagggcagtgagggggtggtt
gtgtatgtggctcccgccagggcccttctcaattaagtggcagcaaccattgagaatcgt
tttaacaaaaatctgccaaatggggaaggtctgtgtggtgttttcacctgggactattgt
cgtgatgttctgaactctcagtgttcttgtttgtgggtgctcatcacagtgcctgcctgc
tttgaaattctgctgctggctctgcaccgccagtcgtgggtgaaaaggatcagatgcatc
atatttgctgaggtcaactgtcttggtggggaaattggagcagaaatctgggagcatctc
ctcatcattatccgctgccccttcctggccctttccgtcaccatcagcaacctggagcat
ctgactgagtggctacaatctgtaaaactgtactggaaacaagcagacagtatgattgaa
aaaaagtattgcttctacaagaaatgccagcggccgtgcccgttcccacaaaactacttg
ctgatgacgcagtcatataaagtgagacttctgctctgtgaagagagatgcagtgactta
gagaagtacgtatggtcagtgaggaatcatgacatttcctttgaccagtttcacctgtgt
gctgtgttgactatggaccatattgaaaagtttggattcccttccaatcttaccctttca
ctttgagaaatggtccagctttatgataccatgtttgaattctggaaaagtcgtctcagg
gctcaggagttgtatccagaggaattcactcattttgagaataaaagagtcattaggaag
atggatgctagaaagtatgaagagagcttaaaggcagagctgaccagctgggtgcggaaa
ggccacaccagcgaggtaattctcacgcgtgttctggatgaaacatctctgcgttctcaa
aatatggcaattatgtttccacttctcgttgaaaagctaagggaaatggggaagttacct
gcactgttttttctgcgtgccttcttttcctcggtttccaagtttgatttcggggctgtg
gagagaagggctgaaagtgtgaaaaagtttctacagcaaaagccggagcgcagaaggccc
cccagggcagataaagaggcccacgacatggcgaacaaactgcgcaaagtgaaaaaatcc
acggagaaatccaagacagtgtgcagcttccgcgcagcagctggcatcctccctgaggca
cgcccgcccctccccccacccctgcttggccttgtccctttctcccaggcccatgccgca
ctgcagtacttgagcaagttaggatttgctgctgacgccccgtgtgcctgcctcccgctg
gcggttcttgagaagaacttggatatcccttgggactgcacgaaggcgaaccagaaggcc
atcgatgctgaggtcagccccggtggaacagttctcggggaggtcactccacacgctcct
agctactactgcatctgcacagcgctgggtgtggccctcagtgcccacctttccagagca
gagctccctgagcacacccttctggctgcccccgagccgcgggccttcagagcttgtatg
gtaacagctacatcaactcttactttgggagttaatatgccatgtaaatctgttgttttt
acagaagattctttttttttttttttggatgccttaaacttctgacagatgtctggctgt
gcagacaaacgtggggaggacctcacgggaagtgtgtccttctacaacatctcattaccc
aagatagaaggacttctgagatcaaatgtgcctaaactgaagggccagtttcctctaagc
ctttgcttggttcttagacacatgctgttatttgcctaggcagatgccaacaccaaggca
tcgtcagttctccaacattcactgatgtccttcaagcaaccaaatatcaagcacatgctg
aaattttattttatatattctttgcagttcttgcttgttgaaactggtttccagggattc
ctggatcaagagtgcgttcccattggatattctgggcttgtctcccctttacactaccac
gagccctccaactttgttttagtgagcttgctggtgaaaggtttatttctcaagtggtgt
gttccaaccaacatcaaaggtaagcagagatgcatttcccacacgcctactcattaa
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