Moschus berezovskii (Chinese forest musk deer): 129557482
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Entry
129557482 CDS
T09065
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
mbez
Moschus berezovskii (Chinese forest musk deer)
Pathway
mbez00100
Steroid biosynthesis
mbez01100
Metabolic pathways
Module
mbez_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
mbez00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
129557482 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mbez01006
]
129557482 (FDFT1)
Enzymes [BR:
mbez01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
129557482 (FDFT1)
Prenyltransferases [BR:
mbez01006
]
Terpene biosynthesis
Squalene/phytoene synthase
129557482 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
Octopine_DH
Motif
Other DBs
NCBI-GeneID:
129557482
NCBI-ProteinID:
XP_055284009
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MAAVACSTKAMSLFKRTLVLSPGAAPRGAGTPSRGCPLPPAAWPSKDRPRGEGVCGRLRS
PAAAGRSPQPHSSASASPTAVCLLCPQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMR
NAVCIFYLVLRALDTLEDDMTISIERKVPLLHNFHSYLYEPDWRFTESKEKDRQVLEDFP
TISLEFRNLAEKYQTVIVDVCQKMGFGMAEFLDKRVTSEREWDKYCHYVAGLVGIGLSRL
FSASELEDPLIGEDTERANSMGLFLQKTNIIRDYLEDQREGREFWPQETWSKYVKKLGDF
AKPENIDLAVQCLNELITNTLHHIPDVITYLSRLRNQSIFNFCAIPQVMAIATLAACYNN
QQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIHQYMEEIYHRIPNSDPCSTKTRQIISTI
RTQNLPNCQLVSRSHYSPIYLSFVMLLAALSWQYLSALSQVTEDYVQTGEH
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagtcgcctgcagcaccaaggccatgtccctcttcaagaggaccttggtactg
agtcccggcgcggcacccaggggcgcgggcaccccctcgcgtggctgccccttgcctccc
gccgcctggccgtccaaggaccggccgcggggagagggcgtgtgcggccggctgcggagc
cccgcggcagccggccgctcgccccagccccactccagcgcctccgcgtctcccaccgcc
gtgtgtctcctctgtccgcaggactcgctcagcagcagcttgaaaacatgctacaagtac
ctgaatcagaccagtcgcagtttcgcagctgttatccaagcgctggatggggaaatgcgc
aatgcagtctgcatattttatctggttctccgagctttggacacgctggaagatgacatg
actatcagtatagaaagaaaagtgccactgctacacaacttccactcatacctttatgag
cctgactggcggttcacggaaagcaaagaaaaggaccgacaagtcctggaggactttcca
acgatctccctggagtttcgaaatctggctgagaaatatcaaacagtgattgtcgatgtt
tgtcagaagatgggctttgggatggcagagtttctggataagcgcgtgacatctgaacgg
gagtgggacaagtactgtcactacgttgctgggctagtgggaattggcctctcccgtctc
ttctcggcctcagagttagaagaccccttaattggtgaagacacagagcgagccaactct
atgggccttttcctgcagaaaacaaacatcatccgtgattatctggaagatcagcgagaa
ggaagagagttttggcctcaagagacttggagcaagtacgtgaagaagctgggtgacttc
gctaagccagagaacatcgacttggccgtgcagtgtctgaacgaactcatcaccaacaca
ctgcaccacatccccgatgtcatcacctacctgtcacgacttagaaaccagagtatattt
aacttctgtgctattccgcaggtcatggccattgctactttggctgcctgttacaataat
cagcaggtgttcaagggggtggtgaagattcgaaaagggcaagcggtcaccctgatgatg
gatgccaccaacatgccagctgtgaaagccataatacaccagtacatggaagagatttat
cacagaattcccaactctgacccctgttccactaaaacacggcagatcatctccaccatc
aggacacagaatctccccaactgtcagctggtctcacggagccactactcgcccatctac
ctgtcattcgtcatgctcctggcggccctgagctggcagtacctgagcgccctctcccag
gtcaccgaggactacgttcagaccggggagcactga
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integrated database retrieval system
