Moschus berezovskii (Chinese forest musk deer): 129558627
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Entry
129558627 CDS
T09065
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
mbez
Moschus berezovskii (Chinese forest musk deer)
Pathway
mbez03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mbez00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129558627 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbez03019
]
129558627 (XAB2)
03041 Spliceosome [BR:
mbez03041
]
129558627 (XAB2)
Messenger RNA biogenesis [BR:
mbez03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
129558627 (XAB2)
Spliceosome [BR:
mbez03041
]
Complex B
Other components
Prp19-related factors
129558627 (XAB2)
Complex C
129558627 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
TPR_2
Suf
TPR_8
TPR_19
TPR_15
ARM_TT21
ARM_TT21_C
TPR_1
TPR_NPHP3
DHR-2_Lobe_A
Motif
Other DBs
NCBI-GeneID:
129558627
NCBI-ProteinID:
XP_055285918
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MVVMARLSRPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAFEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATIVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETSSELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEK
ATKVSFKQVDDLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAVFLEEHQYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRSIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
REMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAERDQPSRAQSKILFVRSDASREELAELAQQANPEEIELGEDEDEDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggctcggctctcgaggcccgagcggccggaccttgtcttcgaggaagag
gacctcccctatgaggaggaaatcatgcgaaaccagttctccgtcaagtgctggctccgc
tacatcgagttcaagcagggggcccccaagcccaggctcaatcaactgtatgagcgggca
ctcaagctgctgccgtgcagctacaaactctggtaccgctacctgaaggcccgccgggcg
caggtgaagcatcgctgcgtgaccgaccccgcctttgaagacgtcaacaactgccatgag
agggcctttgtgttcatgcacaagatgccccggctgtggctcgattactgccagttccta
atggaccagggacgtgtcacacacacgcgccgaactttcgaccgggccctccgggcattg
cccatcacccagcactctcgtatttggcccctgtatctgcgcttcctgcgctcacacccc
ctgcctgagactgccgtgcggggctaccgtcgcttcctcaagctgagccccgaaagcgct
gaggagtatattgagtacctcaagtcaagtgaccggctggatgaggcagcgcagcgcctg
gccaccatagtgaacgatgaacgcttcgtgtcaaaggctggcaagtccaactaccagctg
tggcacgagctctgcgacctcatctcccagaaccctgacaaggtgcagtctctcaatgtg
gacgccatcatccgcgggggccttacccgcttcactgaccagctgggcaagctctggtgt
tcgctggccgactactacatccgtagcggtcacttcgagaaggctcgggacgtgtacgaa
gaggccatccggactgtgatgactgtgcgggacttcacccaggtgtttgacagctacgcc
caattcgaggagagtatgatcgcggcgaagatggagacctcctcagagctggggcgggag
gaggaggatgacgtagacctggagctaaggctggcccgctttgagcagctcatcagccgg
cggcccctgctcctcaacagcgtcctgctgcgccagaacccgcaccacgtgcacgagtgg
cacaagcgcgtggccctgcaccagggccgtccccgggagatcatcaatacgtacacggag
gctgtgcagacagtggaccccttcaaggccaccggcaagccccacacgctgtgggtcgcg
ttcgccaagttttacgaggacaatggacagctggatgatgcccgcgtcatcttggagaaa
gccaccaaggtgagtttcaagcaggtggacgaccttgccagcgtgtggtgcgagtgtggc
gagctggagctccggcacgagaactacgaccaggccttgcgacttctgcggaaggcgaca
gcgctgcctgcgcggcgtgctgagtactttgatggctcagagcctgtgcagaaccgtgtg
tacaagtctctgaaggtgtggtccatgctggctgacctggaggagagcctcggcaccttc
cagtccaccaaggcagtgtatgaccgtatcctggacctgcgcatcgccacgccccagatc
gtcatcaattacgccgtgttcctggaggagcaccagtactttgaggagagcttcaaggca
tatgagcgtggcatctcgttgttcaagtggcccaacgtctcggacatctggagtacctac
ctgacgaagttcattgctcgctacgggggccgcaagctggagcgggcacgggacctcttt
gagcaggcgctggatggctgccctcccaaatacgccaagacgctgtacttgctgtatgca
cagctggaagaagagtggggcctggcgcggcacgccatggccgtgtatgagcgcgccacc
agggccgtggagcctgcgcaacagtacgacatgttcaacatctacatcaagcgggcggct
gagatctacggggtcacccacacccgcagcatctaccaaaaggccattgaggtgctgtct
gatgagcatgcccgggagatgtgcctgcggttcgctgacatggagtgcaagctcggggag
attgaccgtgcccgggccatatacagcttctgctcgcagatctgcgacccccggacgact
ggggccttctggcagacatggaaggacttcgaggtccggcatggcaatgaagacaccatc
cgggagatgctgcggatccgccgcagcgtgcaggccacatacaacacacaggtcaacttc
atggcctcgcagatgctcaaggtgtcgggcagcgccacgggcaccgtgtccgacctggcc
cccgggcagagcggcatggatgacatgaagctgctggagcagcgtgctgagcagctggca
gcagaggcggagcgggaccagccctcacgggcccagagcaagatcttgtttgtgaggagt
gacgcttcccgggaggaactggccgagctggcccagcaggccaacccagaggagatcgag
ctgggcgaggacgaggatgaggatgagatggacctggagcccaacgaggtgcgcctggag
cagcagagcgtgccagcagctgtgttcgggagcctgaaggaagactga
DBGET
integrated database retrieval system
