Moschus berezovskii (Chinese forest musk deer): 129559228
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Entry
129559228 CDS
T09065
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2 isoform X1
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
mbez
Moschus berezovskii (Chinese forest musk deer)
Pathway
mbez03008
Ribosome biogenesis in eukaryotes
mbez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbez00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129559228 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
129559228 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbez03021
]
129559228 (XRN2)
03019 Messenger RNA biogenesis [BR:
mbez03019
]
129559228 (XRN2)
03009 Ribosome biogenesis [BR:
mbez03009
]
129559228 (XRN2)
03016 Transfer RNA biogenesis [BR:
mbez03016
]
129559228 (XRN2)
Transcription machinery [BR:
mbez03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129559228 (XRN2)
Messenger RNA biogenesis [BR:
mbez03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
129559228 (XRN2)
Ribosome biogenesis [BR:
mbez03009
]
Eukaryotic type
Pre-60S particles
RNases
129559228 (XRN2)
Transfer RNA biogenesis [BR:
mbez03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
129559228 (XRN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
129559228
NCBI-ProteinID:
XP_055286776
LinkDB
All DBs
Position
Unknown
AA seq
951 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAIEKQRVREEILAKGGYLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNNDPGWRNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCGLCNQFGHDVKDCEGLPREKKGKHDELADSLPCAEGE
FIFIRLSVLREYLERELTMASLPFTFDIERSIDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKE
KRKRMKRDQPSFSPGGILTPHALGSRSSPGSQVACNPRQAAYEMRMQNNLSPSVSPNASF
ASDGSPSPRGGIKRKAEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQ
SYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMG
VFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRA
ALEEVYPDLTPEETRRNSLGGDILFVGKHHPLHDFILELYKTGSTESVAVPPELCHGIQG
KFSLDEEAVLPDQVVCSPIPVLKDLTHNAVISINFKDPQFAEDYIFKAVMLPGARKPAPV
LKPSDWEKSSNGRQWKPQLGFNRDRRPVHLDPAAFRALGHVMPRGSSGTGVYSNAAPPPA
AFQGNVYRPLLRGQAQIPKLMSNVRPQDSWRGPPPLFQQQRFDRGVGAEPLLPWNRMLQT
QNAAFQPNQYQMLAGPGGYPPRRDDRGGRQGYPREGRKYPLPPPSGRYSWN
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccggccttcttccgctggctcagccgcaagtacccgtcgatcattgtcaac
tgcgtggaagagaagccaaaagaatgcaatggtgtaaagattcctgtcgatgccagtaag
cctaaccccaatgatgtggagtttgataatctgtatttggatatgaatggaatcatccac
ccctgtacgcatcctgaagacaaaccagcaccaaaaaacgaggatgaaatgatggttgcg
atctttgagtacattgacagactcttcagtattgtcagaccaagacggcttctctacatg
gcaatagatggagtggcaccgcgcgctaaaatgaaccagcagcgttcaaggaggttccga
gcatccaaagaaggaatggaagcagcgatagagaagcagcgagtcagggaggagatactg
gcgaaaggtggctatcttcctccagaagaaataaaagaaagatttgacagcaactgtatt
acaccaggaactgagttcatggacaatcttgctaaatgccttcgctattacatagctgat
cgtttaaataatgaccctggctggagaaatttgacagttattttatctgatgctagtgct
cctggtgaaggggaacataaaatcatggattatattagaagacaaagagcccagcctaac
catgacccaaacactcatcactgcttatgtggagcagatgctgatctcattatgcttggc
cttgctacccatgagcccaactttaccattatcagagaagaattcaaaccaaacaaaccc
aaaccctgtggtctttgtaatcaatttggacacgatgtcaaggactgtgaaggtttgcca
agagaaaagaagggaaagcacgatgaactggcagatagccttccttgtgcagaaggagag
tttatcttcattcgtctcagcgtcctccgtgagtatttggaaagagagctcaccatggcc
agcctgccattcacgtttgatattgagaggagcattgatgactgggtcttcatgtgcttc
tttgtgggaaacgacttccttcctcacctgccatccttagagattagggaaggtgccatt
gaccgcttggttaacatatacaaaaatgtggtacacaaaaccgggggttaccttacagaa
agtggttatgtcaatctgcagagagtacagatgatcatgttagcagttggtgaagttgag
gatagcatttttaaaaaaagaaaggatgatgaggacagttttagaagacgacagaaagaa
aaaagaaagagaatgaagcgagatcaaccatctttctctcctggtggaatattaacccct
catgcccttggttcaagaagctcaccaggatctcaagtggcctgtaatccaagacaagcg
gcttatgaaatgaggatgcagaataacttgagtccttcagtctctcctaatgcgagtttc
gcttctgatggctccccatctccgagaggaggaattaaacgaaaagcggaagacagtgac
agtgaacctgagccagaggataacgtcaggttatgggaagctggttggaaacagcgatac
tacaagaacaaatttgatgttgatgcagcagatgagaaattccgacgtaaagttgttcag
tcttacgttgaaggactctgctgggttctacgatattattaccagggctgtgcatcctgg
aagtggtattacccgttccattatgcaccatttgcttcagacttcgaagggattgcagac
atgccttctgattttgagaagggtaccaaaccgtttaaaccactggaacaacttatgggg
gtttttccagctgctagtggtaactttctacctccatcatggcggaagctcatgagtgat
ccagattctagtataattgacttctaccccgaagattttgctattgatttgaatgggaag
aagtatgcatggcaaggtgtggctctgttgccgtttgtggatgagcggagactgcgtgct
gccctggaagaggtgtacccagacctcacccctgaagagaccagaagaaacagtcttgga
ggcgacatcttatttgttgggaaacatcacccactgcacgacttcattttagagctgtac
aagacaggttccacagagtcagtggctgtaccacctgaactatgtcatgggatccagggg
aagttttctttggatgaggaagctgttcttccagatcaagtagtatgctctcctattcct
gtgttgaaggatctgacacacaatgctgtgatcagtatcaattttaaagacccacagttt
gctgaagattacatttttaaagctgttatgcttccgggagcaagaaaacccgcaccggtc
ctgaaacctagtgactgggagaaatccagcaacggacggcagtggaagccccagctcggc
tttaaccgggaccggcggcctgtccacctggatcctgcagccttcagggctttgggccat
gttatgccaagaggctcctctggaactggcgtctacagcaatgctgcgccaccacctgca
gctttccaggggaacgtgtaccggccacttttgcgaggacaagcccagattccaaagctc
atgtcaaatgtgaggccccaggactcctggcgaggtccccctccccttttccagcagcaa
agatttgacagaggtgttggggccgaacctctgctaccatggaaccggatgctccaaacc
caaaatgcagccttccagccaaaccagtatcagatgctagctgggccaggcgggtatcca
cccagacgtgacgatcgtggagggagacagggatatcccagagaaggaaggaaataccct
ttgccaccaccctcaggaagatacagttggaattag
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