Moschus berezovskii (Chinese forest musk deer): 129559975
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Entry
129559975 CDS
T09065
Symbol
PABPC1
Name
(RefSeq) polyadenylate-binding protein 1
KO
K13126
polyadenylate-binding protein
Organism
mbez
Moschus berezovskii (Chinese forest musk deer)
Pathway
mbez03015
mRNA surveillance pathway
mbez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbez00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129559975 (PABPC1)
09123 Folding, sorting and degradation
03018 RNA degradation
129559975 (PABPC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbez03019
]
129559975 (PABPC1)
03041 Spliceosome [BR:
mbez03041
]
129559975 (PABPC1)
Messenger RNA biogenesis [BR:
mbez03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
129559975 (PABPC1)
mRNA cycle factors
Stress granule specific factors
129559975 (PABPC1)
Spliceosome [BR:
mbez03041
]
Complex C
Other components
Complex C specific factors
129559975 (PABPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_7
RRM_5
RRM_10
RBD_RDR6
RRM_occluded
RRM_3
YflT
Motif
Other DBs
NCBI-GeneID:
129559975
NCBI-ProteinID:
XP_055287929
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFER
HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKN
LDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
KPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQTQNRA
AYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPAAPRPPFSTMRPASSQVPRVMSTQ
RVANTSTQTMGPRPAAAAAAATPAVRTVPQYKYAAGVRNPQQHLNAQPQVTMQQPAVHVQ
GQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESP
ESLRSKVDEAVAVLQAHQAKEAAQKAVNSATGVPTV
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccagcgcccccagctaccccatggcctcgctctacgtgggggacctacacccc
gacgtgaccgaggcgatgctctatgagaagttcagcccggccgggcccatcctctccatc
cgggtctgcagggacatgatcacccgccgctccttgggctacgcgtatgtgaacttccag
cagccggcggacgcggagcgtgctttggacaccatgaattttgatgtgataaagggcaag
ccagtacgcatcatgtggtctcagcgtgatccatcacttcgcaaaagtggagtgggcaac
atattcattaaaaatttggataaatccattgataataaagcactgtatgacacattttct
gcttttggtaacatcctttcatgtaaggtggtttgtgatgaaaatggttccaagggttat
ggatttgtgcattttgagacacaagaagcagctgaaagagctattgaaaaaatgaatggg
atgcttctaaatgatcgcaaagtatttgttggaagatttaagtctcgtaaagaacgagaa
gcagaacttggagctagggcaaaagagttcaccaatgtttacatcaagaattttggagaa
gacatggatgatgaacgccttaaggatctctttggcaagtttggacctgccttaagtgtg
aaagtaatgactgatgagagtggaaaatccaaaggctttggatttgtaagctttgaaagg
catgaagatgcacaaaaagccgtggatgagatgaatggaaaagagctcaatggaaaacaa
atttatgttggtcgagcccagaaaaaagtggaacgacagacagaacttaagcgcaaattt
gaacagatgaagcaagataggatcaccagataccagggtgttaacctttatgtgaaaaat
cttgatgatggtattgatgatgaacgtctccggaaagagttttctccatttggcacaatc
accagtgcaaaggttatgatggagggtggtcgcagcaaaggttttggttttgtatgtttc
tcctccccagaagaagccactaaagcagttacggaaatgaacggtagaattgtggccacc
aagccattgtatgtagctttagctcagcgcaaagaagagcgccaggctcacctcactaac
cagtatatgcagaggatggcaagtgtaagagctgtgcccaaccccgtaatcaacccctac
cagccagcacctccttcaggttacttcatggcagctatcccacagactcagaaccgtgct
gcatactatcctcctagccaaattgctcaactaagaccaagtcctcgctggactgctcag
ggtgccagacctcatccattccaaaatatgcccggtgctatccgcccagccgctcctaga
ccaccatttagtactatgagaccagcttcttcacaggttccacgagtcatgtcgacacag
cgtgttgctaacacgtcaacacagacgatgggtccacgtcccgcagctgctgcagctgca
gctactcctgctgttcgcaccgttccacagtacaaatacgctgcgggagttcgcaatcct
caacaacatcttaacgcacagccacaggtcaccatgcagcagcccgctgttcatgtacaa
ggtcaggagcctctgactgcttccatgttggcatctgcccctcctcaagagcagaagcaa
atgttgggtgaacggctctttcctctaattcaagccatgcaccctactcttgctggtaaa
atcactggcatgttgttggagattgataattcagaacttcttcatatgcttgagtctcca
gagtctctccgttctaaagttgatgaagctgtagctgtactacaagcccaccaagcaaaa
gaggctgcccagaaagcagttaacagtgccactggggttccaactgtttaa
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