Moschus berezovskii (Chinese forest musk deer): 129561338
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Entry
129561338 CDS
T09065
Symbol
PRKN
Name
(RefSeq) E3 ubiquitin-protein ligase parkin isoform X1
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
mbez
Moschus berezovskii (Chinese forest musk deer)
Pathway
mbez04120
Ubiquitin mediated proteolysis
mbez04137
Mitophagy - animal
mbez04141
Protein processing in endoplasmic reticulum
mbez05012
Parkinson disease
mbez05014
Amyotrophic lateral sclerosis
mbez05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mbez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129561338 (PRKN)
04120 Ubiquitin mediated proteolysis
129561338 (PRKN)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
129561338 (PRKN)
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
129561338 (PRKN)
05014 Amyotrophic lateral sclerosis
129561338 (PRKN)
05022 Pathways of neurodegeneration - multiple diseases
129561338 (PRKN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mbez04131
]
129561338 (PRKN)
04121 Ubiquitin system [BR:
mbez04121
]
129561338 (PRKN)
03029 Mitochondrial biogenesis [BR:
mbez03029
]
129561338 (PRKN)
Enzymes [BR:
mbez01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
129561338 (PRKN)
Membrane trafficking [BR:
mbez04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
129561338 (PRKN)
Aggrephagy
Other aggrephagy associated proteins
129561338 (PRKN)
Xenophagy
Other xenophagy associated proteins
129561338 (PRKN)
Ubiquitin system [BR:
mbez04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
129561338 (PRKN)
Mitochondrial biogenesis [BR:
mbez03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
129561338 (PRKN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
Rad60-SLD
IBR
IBR_1
IBR_2
Motif
Other DBs
NCBI-GeneID:
129561338
NCBI-ProteinID:
XP_055289898
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MLPLCTETLKVFVRFNSNHGFPVEVDSDTSIFQLKEVVAKRQGVPADQLCVIFAGKELRN
DLTVQSCDLDQQSIVHIVLRPRRKGPEGHTSRGDSPRPAWGHSDREPESLTRVDLSSSVL
PADSVGLAVILQDGEESGASSAPRPAGRPTYNSFYVYCKGPCQGVQPGKLRVRCSTCQQP
TLTLAQGPSCWADVLIPNQMSGECQSPNCPGTRAEFFFKCGAHPTSDKETSVALNLITTN
SRDISCITCTDIRNPVLVFQCIHRHVICLDCFHLYCVTRLNDRQFVHDPQLGYSLPCVAG
CPNSLIKELHHFRILGEEQYNRYQQYGAEECVLQLGGVLCPSPGCGAGLLPEPGQRKVTC
EAGHGLGCGFVFCRDCKEPYHEGDCGAVIEASGTVTQAYRVNEKAAEQARWEEASKETIK
KTTKPCPRCHVPVEKNGESGLAEERGDGGLFSEGGKEVRIYKGLLAGELSTGALQPSGQG
LNLSAHVKFLNLLNHKSWSVK
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgttgcctctgtgcacggaaaccttaaaagtgtttgtcaggttcaactctaaccacggg
ttcccagtggaggtcgattctgacaccagcatcttccagctcaaggaggtggttgctaag
cgacagggggttccagctgaccagttgtgtgtgatattcgcagggaaggagcttcggaat
gacttgacagtgcagagctgtgacctggatcagcagagcatcgttcacattgtgttgaga
ccgcggagaaaaggcccagaagggcacacatctcggggggacagcccgcggcccgcttgg
gggcactctgacagggagcccgagagcctgactcgcgtggacctcagcagctcggtgctc
ccggccgactcggtgggcctggctgtcatactgcaggacggcgaggagagcggcgcctcg
tcagcccccaggccagcaggcagaccgacctacaacagcttttatgtctactgcaaaggc
ccgtgtcaaggagtgcagcccggaaagctcagggtgcggtgcagcacctgccaacaacca
acgctcaccttggcccagggtccttcctgctgggcggatgtcttaatcccaaaccaaatg
agtggtgaatgccagtctccaaactgccctgggactagagcggaatttttctttaaatgt
ggagcacacccgacctctgacaaggaaacatccgtagctttgaacctgatcacgacaaat
agtcgagacatcagctgcataacgtgtacggacatcaggaaccccgtcctggttttccaa
tgcatccaccgccacgtgatctgcttagactgtttccacctgtactgtgtgaccagactc
aatgatcggcagtttgtccacgaccctcagcttggctactctctgccttgtgtggctggc
tgtcccaactccttgattaaagagctccatcacttcaggattcttggagaagagcagtac
aaccggtaccagcagtacggggcggaagagtgcgtgctgcagctagggggcgtgctctgc
cccagcccgggctgcggagcggggctgcttccagaacccggccaacggaaggtcacctgc
gaagcgggccatggcctgggctgcgggttcgtcttctgccgggactgtaaggaaccgtac
cacgaaggtgactgcggcgccgtgattgaagcctcaggaacagtcactcaggcctacaga
gtcaatgagaaggcggcagagcaggcccggtgggaggaagcctccaaagagacaatcaag
aagaccaccaagccctgtccccgctgccacgtgcctgtagaaaaaaacggtgagtctggg
ctggccgaagagcgaggggatggcggcctcttctcagagggtggcaaagaagtcaggatc
tacaagggcttgctagctggggagctcagcactggagctttgcaaccatctggccagggt
ttgaatctcagtgcccatgtcaagtttcttaacctcctaaaccacaagtcctggtctgta
aaatag
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integrated database retrieval system
