Moschus berezovskii (Chinese forest musk deer): 129562208
Help
Entry
129562208 CDS
T09065
Symbol
HTT
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
mbez
Moschus berezovskii (Chinese forest musk deer)
Pathway
mbez05016
Huntington disease
mbez05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mbez00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
129562208 (HTT)
05022 Pathways of neurodegeneration - multiple diseases
129562208 (HTT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbez03019
]
129562208 (HTT)
04131 Membrane trafficking [BR:
mbez04131
]
129562208 (HTT)
03029 Mitochondrial biogenesis [BR:
mbez03029
]
129562208 (HTT)
Messenger RNA biogenesis [BR:
mbez03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
129562208 (HTT)
Membrane trafficking [BR:
mbez04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
129562208 (HTT)
Mitochondrial biogenesis [BR:
mbez03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
129562208 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_GCN1
HEAT_EF3_N
DUF2357
Motif
Other DBs
NCBI-GeneID:
129562208
NCBI-ProteinID:
XP_055291279
LinkDB
All DBs
Position
Unknown
AA seq
3124 aa
AA seq
DB search
MATLEKLMKAFESLKSFQQQQQQQPPPPPPPPQPPQPPPQAQPPPQPPPPPPPPPLGPAA
ADEPLHRPKKDLSATKKDRVNHCLTICENIVAQSLRNSPEFQKLLGIAMELFLLCSDDAE
SDVRMVADECLNKVIKALMDSNLPRLQLELYKEIKKNGAPRSLRAALWRFAELAHLVRPQ
KCRPYLVNLLPCLTRTSKRPEESVQETLAAAIPKIMAAFGNFANDNEIKVLLKAFIANLK
SSSPTVRRTAAGSAVSICQHSRRTQYFYSWLLSVLLGLLVPVEGEHPSLLTLGTLLALRY
LVPLLQQQVKDTSLKGSFGVTRKETEVSPSTEQLVQVYELTLHYTQHQDHNVVTGALELL
QQLLRTPPPELLRALTMAGGVRQLAAAKDEPGGRSRSGSIVELIAGGGSSCSPVLSRKQK
GKVLFGEAAPLEDDSESRSEGSSPAFSASVKGEVGGELAASSGVSTPGSTSSAADSAGHD
IITEQPRSQHTLQTDSVDLAACDLTSAATDGDEEDILSHSSSQTSAVPSDPAMDLNDGTQ
ASSPISDSSQTTTEGPDSAVTPSDSSEIVLDGADSQYPGMPVGQTEDEDATAILPDEDAE
AFRNSSIALQQAHLLKSMGHSRQASDSSVDRFVSREEAAEPGDPESKPCRVKGDIGQSTD
EDSAPLVHCVRLLSASFLLTGEKNALVPDRDVRVSVKALALSCVGAAVALHPESFFSKLY
RVPLDTVEYPEEQYVSDILNYIDHGDPQVRGATAILCGTLVCSVLSRCRFHVAGWMGAIR
ARTGNTFSLADCIPLLQKTLKDESSVTCKLACAAVRLCVMSLCSSSYSAWGLQLITDLLA
LRSSSYWLVRTELLETVAEIDFRLVSFLEAKAETLHRGAHHYTGLLKLQERVLSNVVIYL
LGDEDPRVRHVAAASLMRLVPKLFYKCDQGQADPVVAVARDQSSVHLTLLMHETQPPSHL
SVSTVTRIYRGYNLLPSITDVTLENNLSRVIAAVSHELITATTRALTFGCCEALCLLSTA
FPVCIWSLGWHCGVPPLSTSDESRKSCTVGMVTMILTLLSSAWFPLDLSAHQDALILAGN
LLAASAPRSLRSSWTSEDEASMAATKQEEVWPALGDRTLVPMVEQLFSHLLKVINICAHV
LDDVAPGPAVKAALPSLTNPPSLSPIRRKGKEKEPGEQASVPVSPKKGGEASPASRPPEA
SGPVATNKSSSLGSFCHLPSYLKLHDVLKATHANYKVTLDLQSSSEKFGGFLRSALDVLS
QILELATLQDIGKCVEEVLGYLKSCFSREPMMATVCVQQLLKTLFGTNLASQFDGLSSHP
SKSQGRAQRLGSSSARPGLYHYCFMAPYTHFTQALADASLRNVVQAEQDQDPSGWFDVLQ
KVSTQLKTNLTSVTKNRADKNAIHNHIRLFEPLVIKALKQYTTTTSVQLQRQVLDLLAQL
VQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSYERYHSKQII
GIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADAGKELETQKEVVVSML
LRLIQYHQVLEMFTLVLRQCHKESEDRWKRLSRQVADVILPMLAKQQMHIDSHEALGVLN
TLFEVLAPSSLRPVDMLLRSMFVTPDTLASVSTVQLWVSGILAILRVLISQSTEDIVLSR
IQELSFSPYLVSCPTISRLRDGDSTSALEEHSEGRQTKNLPEETFARFLLQLVGILLEDI
VTKQLRVEMSEQQHTFYCQELGTLLMCLIHIFKSGMFRRITTAASRLLRDGADGSFYSLE
SLNAWVRAMVPTHPGLVLLWCQILLLISHTDYRWWAEVQQTPKRRSLSSTKSLSPEMSGE
DEDPDVASKLGMCNSEIVRRGALILFCDYVCQNLHDSEHLTWLIVNHIQDLINLSHEPPV
QDFISAIHRNSAASGLFIQAIQSRCENLSTPTTLKRTLQCLEGIHLSQSGAVLTLYVDKL
LCTPFRVLARMVDTLACRRVEMLLAANLQSSTAQLPVEELIRIQEHLQSSGLAQRHQRLY
SLLDRLRLASAPGSRGPTAPVTAHPLDGDGPLALEAVNPDKDWYVRLVKSQCWTRSDSAL
LEGAELVSRIPAGDLGAFMMHSEFNLSLLAPCLGLGMREISGGQQSPLFEAALTATLDRV
TVVVQQLPTVHQAFQPFLPTQPTAYWSKLDDLFGDAALYRTLTTLARALAQYLLVFSKLP
SHLHLPPEKERDTVKFVVMTLEALSWHLIHARIPLSLDLQAGLDCCCLALQLPGLWSLLA
APDMVTHACSLIHCVRFILEAIVVQPGDQLLSPERKTSTPKSAREDDVDSDTQNSQCVTA
ACGMVAEMLECLPSVLALGHKRNSHTPAFLTPVLRNIIVSLARLPLVNSYTRVPPLVWKL
GWSPKPGGDFGTVFPEIPVEFLQEKEVFKEFIYRINTLGWTSRTQFEETWATLLGVLVTQ
PLVMEQEESPPEEDTERTQIHVLAVQAITSLVLSAMTVPVAGNPAVSCLEQQPRNKPLKA
LDTRFGRKLSVIRGIVEQEIQAMVSRRENAATHHLYQAWDPVPSLAPATTGALISHDKLL
LQLNPERELGDMSYKLGQVSIHSVWLGNSITPLREEEWDEEEEEEAEAPAAASPPTSPLN
SRKHRAGVDIHSCSQFLLELYSRWILPSSSTRRTPVILISEVVRSLLVVSDLFTERSQFE
MMYLTLTELRKVHPSEDEILLQYLVPATCKAAAVLGMDKAVAEPVSRLLESALRSSHLPS
TMGALHGVLYVLECDLLDDTAKQLVPVISDYLLSNLQSRAHCVNVHSQQHVLVMCATAFY
LIENYPLDVGPEFSASIIQMCGVMLSGSEEATPSVVYHCVLRGLERLLLSEQLSRLDAES
LVKLSVDRVNVHSPHRAMAALGLMLTCMYTGKEKVSPGRASEPSPATPDSESVIVAMERV
SVLFDRIRKGFPCEARVVARVLPQFLDDFFPPQDVMNKVIGEFLSSQQPYPQFMATVVFQ
VFQTLHGAGQSSMVRDWVMLSLSNFTQRSPVAMAMWSLSCFFVSASTSPWVSAILPHVVS
RMGKLEQVDVNLFCLVAADFYRHQIEEELDRRAFQSVFEVVAVPGNPYHRLLACLRSIHK
AAAC
NT seq
9375 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctggaaaagctgatgaaggccttcgagtccctcaaatccttccagcagcag
cagcagcagcagccgccgccgccgccgccgccgcctcagcctcctcagccgccgccgcaa
gcgcagccgccgcctcagccgcccccgccgccgccgccgccaccgcttggcccggccgcg
gccgacgagccgctgcaccgaccaaagaaggacctctcagccaccaagaaagaccgtgtg
aaccactgtctgacaatatgtgagaacatagtggcacagtctctcagaaattctccagaa
tttcagaaacttctgggcattgctatggaactttttctgctgtgcagtgacgacgcggag
tcagatgtcaggatggtggctgatgaatgcctcaacaaggtcataaaagctttgatggat
tccaatcttccgaggttgcagctcgaactctataaggaaattaaaaagaacggcgcccct
cggagcctgcgcgctgccctgtggaggtttgctgagctggcgcacctggttcggcctcag
aaatgcaggccgtacttggtgaacctgttgccgtgcctgacacgcacaagcaagagaccg
gaggagtctgttcaggagacgttggctgcagcgatccctaaaattatggctgcttttggc
aactttgcgaacgacaatgagattaaggttctgttgaaggctttcatcgcgaacctgaag
tccagctccccgaccgtgcggcggacagcggcaggctcggcggtcagcatctgccagcac
tccaggaggacgcagtacttttacagctggttgctcagcgtgctcctaggtctgctggtc
cccgtggaaggggagcaccccagcctcctgactctcggcaccctgctcgcgctgaggtac
ttggtgcccctgcttcagcagcaggtcaaggacacgagcctgaaaggcagcttcggtgtg
acgcggaaggagacagaggtctctccctcgacggagcagctcgtccaggtgtacgagttg
accttgcactacacccaacaccaggaccacaacgtcgtgaccggggccctggagctgctg
cagcagctcctccgaaccccgccgcccgagctcctgcgcgcactgaccatggcgggtggt
gtccggcagctcgccgccgccaaggatgagcccgggggccgcagtcggagcgggagcatc
gtggagctgatagctggagggggttcttcatgcagccctgtcctttcaagaaaacaaaaa
gggaaagtgctcttcggagaagcggcgcccctggaggatgactcggagtccagatcggag
ggcagcagccccgccttctcagcctcagtcaagggtgaggtcggaggcgagctggctgcc
tcttccggggtttccacccccggctccaccagctcagcagctgactctgcgggtcacgac
atcatcaccgagcagccccggtcacagcacacgcttcagacagactcggtggatctggcc
gcctgtgacttgacgagcgccgccaccgacggggacgaggaggacatcctgagccacagc
tccagccagacgagcgccgtcccttctgaccccgccatggacctgaacgacggcacgcag
gcctcctcgcccatcagtgacagttcccagaccaccaccgaggggcccgattcagccgtg
accccttccgacagttctgaaattgtgttggatggcgccgacagccagtatccagggatg
ccggtggggcagaccgaggacgaggacgccactgccatccttcctgacgaggacgcagag
gctttcaggaactcttccatcgcccttcaacaagcacatttgttgaaaagcatgggccac
agcagacaggcctctgacagcagtgtggatagatttgtctcaagagaggaagctgccgaa
ccaggggacccagagagcaagccctgccgggtcaaaggcgacatcggccagtccaccgac
gaggattccgcccctcttgtccattgcgtccgccttttgtctgcttcatttctactcaca
ggggaaaagaatgccttggttccggacagggacgtgcgggtcagtgtgaaggcactggcc
ctcagctgtgttggagccgccgtggcccttcatcctgagtctttcttcagcaaactctac
agagtgcctcttgacaccgtggaataccctgaggagcagtacgtgtcagacatcttgaac
tacatcgatcatggggacccacaggtccgaggagccacagccatcctctgcgggaccctc
gtctgctccgtccttagccggtgccgcttccacgtggcgggctggatgggcgccatcaga
gcccggacaggaaatacattttctctggcggactgcattcctctgctgcagaaaactctg
aaggatgaatcctcggttacttgcaagttggcttgtgccgctgtgaggctctgtgtcatg
agcctctgcagcagcagctacagcgcttgggggctgcagctcatcaccgacttgctggcc
ctgcggagcagttcctattggctggtgcggacggagcttctggagaccgtggcagagatc
gacttcaggttggtgagctttctggaggccaaagcagaaaccctgcacagaggggcccat
cactatacagggcttttaaaactgcaggagcgggtactcagtaacgttgtcatctatctg
cttggagatgaagaccccagggtgcggcatgttgctgcagcttcgttgatgaggcttgtt
ccaaagctgttttacaagtgcgaccaaggccaggctgacccagtggtggccgtggcgagg
gaccagagcagcgtgcacctgacacttctcatgcacgagacgcagcctccgtcccacctc
tccgtcagcaccgtgaccagaatttatagaggctataacctgttaccaagcatcacagat
gtcactctggaaaataacctctcaagagtcattgcggcggtttctcatgagctgatcaca
gcgaccacgagggcactcacatttggatgctgtgaagctctgtgtctgctttcaactgcc
ttcccggtttgcatttggagtttaggttggcactgcggagtgcccccgctgagcacctca
gacgagtccaggaagagctgcacggtggggatggtcacaatgatcctgaccctgctgtcg
tcagcctggttcccactggatctctccgcccaccaggatgctctgattttagccgggaac
ttgctggcagccagtgcccccaggtctctgaggagctcgtggacctctgaagatgaggcc
agcatggcggccaccaaacaggaggaggtgtggccggccctgggtgaccggaccctggtg
cccatggtggagcagctcttctcccacctgctgaaggtcatcaacatctgcgcacatgtc
ctggacgatgtggctccgggacccgcagtgaaggcagccctgccttctctcacaaacccg
ccttctctgagcccaatccgacggaagggaaaagagaaggagccgggagagcaggcgtct
gtgcccgtgagtcccaagaaaggcggtgaggccagtccagcctctcgaccacctgaagcc
tcagggcctgttgccacaaacaagtcctcgtcactggggagcttctgtcacctaccttct
tacctcaaactgcacgacgtcctgaaagccactcatgccaactacaaggtcaccttggat
cttcagagcagcagcgagaagtttgggggtttcctgcgctctgccttggatgttctatct
cagattctggagctggcgacactgcaggacatcgggaagtgtgttgaagaggtcctggga
tacctgaagtcctgcttcagtcgagagccgatgatggcgaccgtgtgtgttcagcagttg
ctgaagactctgttcgggacaaacctggcctcccagtttgacggcctgtcttcccacccc
agcaagtcgcagggccgtgcgcagcgcctcggctcctccagcgctcggcccggcctgtac
cactactgcttcatggcgccgtacacccacttcacccaggccttagcggacgccagcctg
cggaatgtggtgcaggcagagcaggaccaggacccctcagggtggtttgatgtcctccag
aaagtgtcgacccagctgaagacgaacctcaccagcgtcacaaagaaccgagcagacaag
aatgctattcataatcacattcgcttgttcgagcctctcgttatcaaagctttaaaacag
tacacaaccacgacctccgtgcagttgcagaggcaggtgctggacttgctggcgcagctg
gttcagctgcgggtcaactactgcctgctggattcagaccaggtgtttattggatttgtg
ctgaagcagtttgaatacattgaagtcggccagttcagggagtcggaggcaattatccca
aacatctttttcttcctggtattactgtcttacgagcgctaccactcaaaacagatcatc
gggatccctaaaatcatccagctctgtgacggcatcatggccagcgggaggaaggcggtg
acgcacgccatacccgccctgcagcccatagtccatgacctcttcgttttaagaggaacc
aataaggctgatgcaggaaaagagcttgaaacccagaaagaggtggtggtgtccatgtta
ctgaggctcatccagtaccatcaggtgctggagatgttcacgctggtcctgcggcagtgc
cacaaggagagcgaggacagatggaagcggctgtctcggcaggtggccgacgtcatcctc
ccaatgctggccaagcagcagatgcacattgattctcacgaggccctgggagtgctgaac
acgttgtttgaggtcttggccccctcctccctgcgccccgtggacatgcttttacggagt
atgtttgttaccccagacaccctggcgtcggtgagcaccgtccagctgtgggtgtcaggc
atcctggccatcttgcgggtgctgatttcccagtcgaccgaagacattgtcctgtcacgc
atccaggagctctccttctctccgtacttagtctcctgtccgacaatcagtaggttacga
gatggggacagtacttcagcactggaggaacacagtgaagggagacagacgaagaatttg
ccggaagaaacatttgccaggttcctgctgcagctggttggcatccttttagaggacatt
gttacaaagcagctgagagtggaaatgagtgaacagcagcacactttctattgccaggag
ctgggcacactgctcatgtgtctgatccacatcttcaagtccgggatgttccggaggatc
accacagctgcctcgaggctcctgagggatggcgcggacggcagcttctacagcctggag
agcctgaacgcgtgggtgcgcgccatggtccccacgcacccgggcctggtgctgctctgg
tgccagatcctgctgctcatcagccacaccgactaccgctggtgggcagaggtgcagcag
acccccaaaagacgcagcctgtccagcacgaagtcgctgagtccggagatgtctggagag
gacgaggatcccgacgtggcttccaagctggggatgtgcaatagcgagatcgtgcggaga
ggcgccctcattctcttctgcgactatgtctgccagaacctgcatgattcggagcactta
acgtggctcattgtgaatcacattcaagacctgatcaacctgtcccatgagcctcccgtg
caggacttcatcagcgccattcatcggaactccgccgccagtggccttttcatccaggca
attcagtctcgctgtgaaaatctttcaactcccaccacgctgaagagaactctccagtgc
ctagaagggatccacctgagccagtcgggcgccgtgctgacactgtacgtggacaagctt
ttgtgcacgccgttccgtgtgctggctcgcatggtcgacacccttgcttgtcgccgggtg
gaaatgcttttggctgcgaatttacagagcagcacggcccagctgccggtggaggagctg
atccggatccaggagcacctgcagagcagcgggttagcacagagacaccagaggctctac
tctctactggacaggcttcgtctcgcctccgcaccggggtcgcgtggccccacagccccc
gtcacagcccaccccctggacggggacgggcccctggcactggaggcagtgaatcctgac
aaagactggtacgtgcggctggtgaagtcccagtgctggactcggtccgactctgccctg
ttggaaggcgcagagctggtgagccggatccccgcgggtgacctgggcgccttcatgatg
cactcggagttcaacctgagcctgttggcaccatgcctgggcctgggcatgcgtgagatc
tcggggggccagcagagccccctttttgaagcagctctcacggcgactctggaccgtgtg
accgttgtggtccagcagcttcccaccgtccaccaggctttccagccgttcctgcctaca
caacccaccgcctactggagcaagctggatgacctctttggggatgctgcgctatatcgg
actctgaccaccctggcccgggccctggcccaatacctgctggtattctccaagctgcct
agccatttgcaccttcctcctgagaaggagagggacaccgtgaagttcgtggtcatgact
ctcgaggcgctgtcgtggcacctgatccatgcacggatcccactgagcctggacctgcag
gcgggcctggactgctgctgcctggccctgcagctgcctggtctctggagtctgctggcc
gcgcccgacatggtgacccacgcctgttccctcatccactgtgtgcggttcatcctggag
gccattgtggtgcagcccggggaccagcttcttagtccagaaagaaagacaagcaccccc
aagtctgccagagaggacgacgtggattcagacacacagaactctcagtgcgtcactgca
gcctgtggcatggtggctgagatgctggagtgcctgccgtcggtgttggccttgggccac
aagaggaacagccacacgcccgcattcctcacgccagtgctcaggaacatcatcgtcagc
ttggcccgcttgccgctcgtcaacagctacacgcgtgtcccgcccctggtgtggaaactt
ggatggtcgcccaaaccgggcggggatttcggcacagtgttccctgagatccctgtggag
ttcctccaggagaaggaggtcttcaaagagttcatctaccgcatcaacactctggggtgg
accagccgcacccagtttgaagagacgtgggccaccctcctcggcgtcctggtgactcag
ccgctcgtgatggagcaggaggagagccccccggaagaggacacggagaggacacagatc
cacgtcctggccgtgcaggccatcacctccctggtgctgagcgcgatgaccgtgcctgtg
gccggcaacccggccgtgagctgcctggagcagcagccccggaacaagcccctgaaagcc
cttgacaccaggtttggcaggaagctgagcgtcatcagagggattgtcgagcaggagatc
caggcgatggtttctaggagagagaacgccgccacccaccacctgtaccaggcgtgggat
cccgtcccatctttggccccggccaccacaggtgctctcatcagccatgacaagctcctg
ctgcagctcaaccccgagcgggagctgggggacatgagctacaagctcggccaggtgtcc
atccactcggtgtggctggggaacagcatcacgcccctgcgcgaggaggagtgggacgag
gaggaggaggaggaggccgaggccccggcagcggcatccccgcccacgtctccgctcaac
tccaggaaacaccgggctggagtcgacatccactcctgttcgcagtttttgcttgagttg
tacagtcgctggatcctgccgtcgagttccaccaggaggacccccgtcatcctgatcagc
gaggtggtgcgctcgctcctcgtggtctcggacctgttcacggagcgcagccagtttgag
atgatgtacctgacgctgacggagctgcggaaggtgcacccctcggaagacgagattctc
ctccagtacctggtgcccgccacctgcaaggcggccgccgtcctcgggatggacaaggcc
gtggcagaaccggtcagccggctgctggagagcgcactcaggagcagccacctgcccagc
acgatgggtgccctgcacggcgtcctgtacgtgctggagtgcgacctcctggacgacacc
gccaagcagctcgtccccgtcatcagcgactacctcctctccaacctccagagcagagcc
cactgcgtgaacgtgcacagccagcagcacgtgctggtgatgtgcgccacggccttctac
ctgattgagaactacccgctggatgtggggccagagttctcggcctccatcatacagatg
tgtggggtgatgctgtctggtagcgaggaggccaccccatccgtcgtctaccactgtgtc
ctgaggggcctggagcgcctcctgctctccgagcagctctcccggctggacgcggagtcc
ctggtcaagctgagcgtggaccgggtgaacgtgcacagcccgcaccgcgccatggcggcc
ctgggcctcatgctcacctgcatgtacacaggaaaggaaaaagtcagtccaggccgagcc
tccgagcccagccctgccaccccggacagcgagtccgtgatcgtggccatggagcgtgta
tccgtcctctttgacaggatccggaaggggttcccctgcgaagcccgcgtggtggcgcgc
gtcctcccccagttcctggacgacttcttcccgccccaggacgtcatgaacaaggtcatc
ggcgagttcctgtccagccagcagccatacccgcagttcatggccactgtcgtgttccag
gtgttccagacgctgcacggcgcagggcagtcatccatggtgcgggactgggtcatgctg
tcgctctccaacttcacgcagcggagcccggtcgccatggccatgtggagtctctcctgc
ttcttcgtcagcgcgtccaccagcccgtgggtctcggcgatcctcccgcacgtcgtgagc
aggatgggcaagctggagcaggtggacgtgaacctcttctgcctggtggccgcagacttc
taccgacaccagatcgaagaggagctcgaccgcagggccttccagtccgtgttcgaggtg
gtcgccgtgcccggaaacccataccatcgcctgctggcttgtttgcggagcatccacaag
gctgccgcgtgttga
DBGET
integrated database retrieval system
