Moschus berezovskii (Chinese forest musk deer): 129562513
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Entry
129562513 CDS
T09065
Symbol
YTHDC2
Name
(RefSeq) 3'-5' RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
mbez
Moschus berezovskii (Chinese forest musk deer)
Brite
KEGG Orthology (KO) [BR:
mbez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mbez03041
]
129562513 (YTHDC2)
Enzymes [BR:
mbez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129562513 (YTHDC2)
Spliceosome [BR:
mbez03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129562513 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
HA2_C
Helicase_C
OB_NTP_bind
R3H
DEAD
HA2_N
Ank_2
AAA_19
nSTAND3
AAA_22
Ank
ATPase
PhoH
AAA_16
AAA_7
UvrD-helicase
AAA_29
T2SSE
ABC_tran
SRP54
AAA_23
Motif
Other DBs
NCBI-GeneID:
129562513
NCBI-ProteinID:
XP_055291672
LinkDB
All DBs
Position
Unknown
AA seq
1429 aa
AA seq
DB search
MSRPSSVSPRPPAPGGAGGGPAPCCPGGGGRAKGLKDIRIDEEVKIAVNIALERFRYGDQ
REMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKKKDGSETAHAMMTCNLTH
NTKHAVRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQIPVKR
GESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPC
RIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLM
AGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFVRYFG
SCPVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQREEKQQTTLTEWYSAQENT
FKPQSQRQRAIPNVTEEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKD
VDAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFSSQVEQLISMGANVHSKASNGW
MALDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVQTNGSDLSAEDRELLKAYHHSFDD
EKVDLDLIMHLLYNICHSCEAGAILIFLPGYDEIVGLRDRILFDDKRFADNAHRYQVFML
HSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVT
MLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTK
LLAPVNCAIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHL
GKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALL
RAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDV
NTNSENWAVVKAALVAGMYPHLVHVDRENVVLAGPKEKKVRFHPTSVLSQPQYKKIPPAN
GQTAAIQALPTDWLIYDEMTRAHRIANIRCCSAVTPVTVLVFCGPARLASNALQEPSSFR
VDGIPNDSSDSEMEDRTTANLATLKLDEWLNFKLEPEAASLLLQLRQKWHSLFLRRMRAP
SKPWSQVDEATIRAIIAVLSTEEQSAGLQQPSGIGQRPRPMSSEELPLASSWRSNNSRKS
SADTEFSDESTTAERVLVKSPAPALHQPQKYKDRGILHPKRSTEDRSDQSSVKSTDSSNY
PSPCASPSPPSSGKGSKSPSPKPNMPIRYFIMKSSNLRNLEISQQKGIWSTTPSNERKLN
RAFWESSVVYLVFSVQGSGHFQGFSRMSSEIGREKSQDWGSAGLGGVFKVEWIRKESLPF
QFAHHLLNPWNDNKKVQISRDGQELEPQVGEQLLQLWERLPLGEKTTTD
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgtctaggccgagcagcgtctccccgcggccgccggctcccggtggggccgggggcggc
cccgcgccctgttgccctgggggcggcggtcgcgccaaggggctgaaggacattcgtata
gacgaggaggtgaagatcgcagtcaatatcgctctggagcgcttccgctatggggaccag
agagaaatggaatttccttcttctttgaccagtacagaaagagcctttattcatcgattg
agtcagtctcttggtttggtttctaaaagtaaaggaaagggagcaaatagatacctaact
gtgaagaagaaagatggatcagaaacagctcatgcaatgatgacctgtaatttgactcat
aatacaaaacatgctgttaggagcctaattcagagatttcctgtcaccaataaagagcgt
actgaacttctgcctaaaacagaaagaggaaatgtgtttgctgttgaagctgaaaatcgg
gaaatgagcaagacaagtgggcgtctcaacaatggcatacctcagattccagtaaaaaga
ggagaatctgaatttgattctttcagacaatctctgccagtgtttgaaaaacaagaggaa
attgttaaaataattaaagaaaataaagtagttttgattgtaggagaaactggatctgga
aagactacacagattcctcagttccttttagatgattgctttaaaaatggtattccctgc
cgtatattctgtactcaaccaagacgattagcagctattgctgtggctgaaagagttgct
gcagagagaagagaaaggattggtcaaacaattgggtatcagatccgtttagaaagcagg
gtttctccaaagacacttctgacattttgcaccaatggggtactgcttcgtacactgatg
gcaggagatagtacattgtcaactgtgacacatgttattgtggatgaagtacatgaaagg
gatcgatttagtgattttttacttacaaagttaagagatttactgcagaagcacccaact
ttgaaactaattctttctagtgctgccttagatgtaaatctttttgtaagatattttggg
agctgtccagtgatatatatacagggaagaccatttgaagtaaaagaaatgtttttggaa
gacattttaagaactactggatatacaaacaaagaaatgttaaaatacaaaaaggaaaaa
caacgagaggaaaaacaacaaaccacacttacagaatggtactcagctcaagagaatact
ttcaagcctcaatctcagagacagagagctatcccaaatgtgactgaagagtatgattta
ttggatgatggtggtgatgctgtcttcagtcagctgacagaaaaagatgtgaattgcctt
gaaccatggttaataaaggaaatggatgcttgtctttctgacatatggctgcataaagat
gttgatgcctttgctcaggtctttcaccttattttaactgaaaatgttagtgttgattat
agacatagtgaaaccagtgcaacagctctgatggttgctgcaggacgaggtttctcaagt
caagtagaacagttaattagtatgggagccaatgttcatagtaaagcatcaaatggctgg
atggctttagattgggctaaacactttggccagactgaaattgtggatcttctagaatct
tacagtgcttctttggaatttggaaatctggatgaaagctctttggttcaaacaaatggg
agtgatctcagtgcagaagacagagagcttctgaaagcttatcaccatagttttgatgat
gaaaaagtagacttggatttgattatgcatcttctatacaatatctgccatagttgtgaa
gctggtgcaatattgatttttctacctggatatgatgaaattgttggtctgagggatcgc
atcctgtttgatgacaagcgttttgctgataatgcacatagatatcaagtctttatgctt
cattcaaatatgcaaacatctgatcaaaagaaggtattaaaaaacccacctgcaggtgtt
cgaaaaataatcctttctaccaatattgccgaaaccagcatcacagtcaatgatgttgtc
tttgttattgattctggtaaggtgaaagagaaatcctttgatgcactgaattttgttaca
atgttaaaaatggtatggatttccaaagctagcgccatacagcgaaaaggcagggcaggg
cgatgcagacctggaatttgtttccgactgttcagtagacttcgattccagaatatgttg
gaatttcagactccagaacttttgagaatgccattacaggaactgtgtttacataccaag
ctgttagccccagttaattgtgctattgctgatttccttatgaaagctcccgaacctcca
ccagctttaattgtaagaaatgctgtacaaatgcttaagacaatagatgcaatggatgca
tgggaagatctcactgaacttggatatcatttggctgacttgccagtagagccacatctt
ggtaaaatggtcctgtgtgctgttgttttgaagtgtctggatcccatccttacaattgcc
tgcacactagcttatcgagacccttttgtcctgccaactcaggcctctcagaaacgtgca
gctatgctttgtaggaaacgtttcaccgcaggaactttcagtgaccacatggcacttctc
agagcattccaggcatggcagaaagctcgaagtgatgggtgggaacgagccttttgtgaa
aagaattttctttcacaagctaccatggaaataatcataggcatgagaactcagttgctt
ggtcaacttagagcatcaggttttgtgagagcaagaggtggtggtgacattcgagatgtt
aacacaaattctgagaattgggctgttgttaaagctgcattggttgcaggcatgtatcct
catttagttcatgtggaccgagagaatgtagtgttggcagggccaaaggagaaaaaagta
cggtttcatcccacttcagttctcagtcagcctcaatataaaaagattcctccagctaat
ggtcaaactgcagcaatccaggcactgcccacagattggcttatttatgatgaaatgacc
agagctcataggatagctaatattagatgctgttcagcagtgacacctgtcactgtgttg
gtattttgtggaccagctaggttggcaagtaatgctcttcaggaaccttcatcttttcgt
gtggatggtattcctaatgacagtagtgatagtgaaatggaagacaggactactgctaat
ttggcaactttaaaacttgatgagtggctcaatttcaaactagagccagaggcagccagt
ttattgctgcaacttagacagaagtggcacagcttatttttacgtcgaatgagagctcca
tccaaaccttggtctcaagttgatgaagctactataagagcaattatagctgttttaagc
actgaagaacaatctgcaggcttacaacagccatctgggattggccaaaggccaagacct
atgtcttcagaagaacttcctttggcatcatcttggaggtcaaataatagtaggaaaagt
tcagcagatactgaattttctgatgagtctactactgcagaaagagtactggtgaaatct
ccagctccagcactacaccaacctcagaagtataaagatagaggaattttgcatcctaaa
cgaagcactgaggaccggtcagatcaatcttctgtgaaatctacagacagcagtaattat
ccaagtccttgtgctagtccttctcctccatcctcaggaaagggctcaaaatctccttca
ccaaaaccaaacatgcctattcgatacttcataatgaagagtagcaatctgagaaacctt
gaaatttctcaacagaagggtatctggtctacaactcctagtaatgagcggaagctaaat
cgagccttttgggaaagcagcgtggtttacttggtattttctgttcaaggatctggacat
ttccagggattttctagaatgtcttctgagataggaagggagaagagtcaggattggggc
tcagctggactaggaggagtgtttaaggtggagtggatacggaaagaaagtcttcccttt
cagtttgcacaccatttactcaatccttggaatgacaacaagaaagtccagataagcaga
gatgggcaggaactagaacctcaggttggtgaacagttgctccagttatgggaacgcctt
ccattgggagaaaaaaccacaactgattaa
DBGET
integrated database retrieval system
