Candidatus Melainabacteria bacterium MEL.A1: BHV42_01820
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Entry
BHV42_01820 CDS
T04546
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mbf
Candidatus Melainabacteria bacterium MEL.A1
Pathway
mbf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BHV42_01820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbf03400
]
BHV42_01820
DNA repair and recombination proteins [BR:
mbf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BHV42_01820
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BHV42_01820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_30
DUF7768
Motif
Other DBs
NCBI-ProteinID:
AOR38006
LinkDB
All DBs
Position
complement(395054..397048)
Genome browser
AA seq
664 aa
AA seq
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MEKKFKIHSKYKPAGDQPKAIEELVEGINAGDDAQTLLGITGSGKTFTIANVIERVQKPT
LIIAHNKTLAAQLYNEFRELFPDNAVEYFISYYDYYQPEAYIPRTDTFIEKSASINEEID
RLRHNATRCLYERNDVIIVASVSCIYGLGLPENYFKGSVELKVGDEIERDDLLKHLVSVQ
YTRNDLVLERSTFRARGDIVEIMPAYEKIITRIYFFGDEIEKIVKIDNVTGEIIETPQSV
VIYPAVHYVSNDENVDETIKLIKEELQHRLVELQNQNKLVEAQRLEQRVKYDIEMIKEMG
YCSGIENYSRIIERRPVGSAPATLLDYFQGDFLTVIDESHVTLPQLKGMYHGDASRKSTL
IDYGFRLPCAKDNRPLKSEEFFKKVHQKIYISATPSEFERKTSSQLVEQIIRPTGLVDPK
ISVRPIESQINDLKAEIQKRVEKNERVLITTLTKRMAEDLTDFFIQEGIKVRYLHSEIQS
LERVEILRDLRLGEFDVLIGVNLLREGLDIPEVSLVAIMDADKEGFLRSETSLIQTIGRA
ARNACGEVIMYADRMTESMENAINETERRRKIQMDYNKKYGIIPQTIKKPIENNLLSLVA
SYRDLEDIVAEEMVDMGIDKKDLPKLIDKLEKDMHKAAKILDFERAAEIRDKLKKMREML
NDKK
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaaatttaaaatacattccaaatataaacctgcgggagatcaaccaaaagca
attgaagaattagttgaggggattaatgccggtgatgatgcgcagacattacttgggatt
accggttcaggtaagacttttactattgcaaatgtaattgaaagagttcaaaagccaact
cttatcattgcgcataacaaaacacttgctgcacaattatacaatgagtttagagaactt
tttcccgataacgcagttgaatatttcataagttattatgattattatcagccggaagcg
tatatcccgagaacggacacatttattgaaaaatccgcatctatcaatgaagaaattgat
aggttacgtcataatgcaacaaggtgcctgtatgagcgaaatgatgtaattatcgtagcg
tctgttagttgtatttatggtttgggattgccggaaaattactttaaaggttctgttgag
cttaaagtcggggatgaaattgagcgagatgatttgttaaaacatttggtaagtgtgcaa
tatacaagaaacgatcttgttttggaacgttctaccttccgtgcaagaggtgatattgtt
gagattatgccggcttatgaaaaaattattactagaatttatttctttggtgacgagatt
gaaaaaattgttaaaattgacaatgtgacaggtgaaattattgaaactccgcaaagtgtt
gttatttatccggcggttcactatgtttctaatgatgagaatgttgatgaaacgattaaa
ttaattaaagaagaattgcagcacagattggttgagctgcaaaatcaaaataagttggtt
gaagcacaaaggttagagcaacgagtaaaatacgatattgaaatgattaaagaaatgggc
tattgttccggtattgaaaactattcaaggattattgagcgtagaccggtcggttctgct
cctgcaacacttttggattattttcaaggtgattttttgactgtaatagatgaatctcac
gttacattgccacaactaaaaggaatgtatcatggtgatgcgtcacgaaaatctactctt
attgattatggtttcagattaccgtgtgcaaaagataatagacctttgaaaagtgaggaa
tttttcaaaaaagttcatcaaaaaatttatatttccgcaactccgtcagaatttgagcgt
aaaacgtcttctcaattggttgagcaaatcatcaggccgacagggcttgttgatcctaag
atttctgttagaccgattgagtcacaaatcaatgatttgaaagctgaaattcaaaaacgt
gttgaaaagaatgaaagagttttgattacaacattgactaagcgaatggcggaggatttg
acagatttctttatccaagaaggaataaaggtgcgttatttacatagtgaaatccaatca
ttagaacgtgtcgaaattcttagagatttgaggttgggcgaatttgatgttttgattgga
gttaacttgttaagggaagggttggatattcctgaagtttcgcttgttgcaattatggat
gcggataaggaaggctttttgagatccgaaacaagtttaattcaaacaattggtcgtgcg
gctcgtaacgcttgcggtgaagttattatgtatgctgacagaatgactgaatctatggaa
aatgcgattaacgaaaccgaaagacgtagaaaaatccaaatggattacaacaaaaaatat
ggtattattcctcaaactattaaaaaaccgattgaaaacaatcttctttctcttgttgca
agttatagagatttggaagatattgttgctgaagaaatggttgatatgggaattgataaa
aaggatttaccgaaacttattgataaactagaaaaagatatgcacaaagctgctaaaatt
cttgattttgaacgagcagcagaaattcgggataagttgaaaaaaatgcgtgaaatgttg
aatgataaaaaataa
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