Candidatus Melainabacteria bacterium MEL.A1: BHV42_02190
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Entry
BHV42_02190 CDS
T04546
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mbf
Candidatus Melainabacteria bacterium MEL.A1
Pathway
mbf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BHV42_02190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbf03019
]
BHV42_02190
03016 Transfer RNA biogenesis [BR:
mbf03016
]
BHV42_02190
Enzymes [BR:
mbf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BHV42_02190
Messenger RNA biogenesis [BR:
mbf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BHV42_02190
Transfer RNA biogenesis [BR:
mbf03016
]
Prokaryotic type
tRNA degradation factors
BHV42_02190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
KH_2
KH_PNO1_2nd
OB_RRP5_4th
KH_NusA_1st
Motif
Other DBs
NCBI-ProteinID:
AOR38073
LinkDB
All DBs
Position
complement(470491..472632)
Genome browser
AA seq
713 aa
AA seq
DB search
MVPETKKFELEIGGKTVTVETGKYAQSANGSVTVRCGDTMLFVHCCVSKEPRVGIDFFPL
LIDYEERMSSIGRIPGGYNRSEGKAGDKAILVSRLIDRPIRPLFPKGYRNDIQIVAQLFS
YDQQNQPDTLAMLGASCALMLSGAPFEGPIGAVRVAKDENGNLIANPTHQQADKSDLDIV
VAGTHDSVIMVEAGCKFVTEDDIMNAVEFAQVEIKKQCEAQVAFAKECGVEKEEFVNPYD
TTEIKKIIEETAHDMIFDAYHNFDRAYRQEKLEEAKKLVKEKIDALPDDDYSKKIMEETG
IDFVAEEFKNAEKHIMRAMILDEGVRADGRKPTEVRPIWCEVGVLPRAHGSAVFTRGQTQ
VLSVATLAGPGMKQELDGVDPQTEKTYMHKYIFPGFSVGEVKPLRGPGRREVGHGNLAER
ANVPALPSQEEFGYTIRVTSDVLESNGSTSMASTCGSSMALMNAGVPVKCMIGGVAMGMI
TEPGKEPVVLTDIQGIEDFLGDMDFKVTGNDTGITALQMDMKAKGIANDTLRRALAQAKE
GRLHILGKMREVISAPADHLSPFAPSISTMTISTEDIGTVIGPGGKQIRAIIDASGAEID
IQDSGVVTITSNDQEGAEIAKRMIKELTFKPEPGMVVKGKVVRIIPIGAFVELAPGKDGM
VHISQVCNERIETIEPHLQVGQEVVVKVIKIDDKGRVNLTIKGVSDEEKAQFN
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggtaccggaaacaaaaaaattcgagcttgaaatcggtggtaaaacagttactgttgaa
actggtaaatatgctcaatctgcaaatggttctgttacagttagatgcggtgatacaatg
ttatttgtacattgttgtgtttctaaagaacctagagttgggattgatttcttcccacta
ctaattgattatgaagaaagaatgtcatctatcggtcgtattccaggtggatacaatcgt
tcagaaggtaaagcaggcgacaaggctatcttggtttcaagacttattgatagaccaatc
agaccgctttttcctaaaggatacagaaatgatatacaaatcgtagctcaattattcagc
tatgatcaacaaaaccagcctgatactttggctatgttaggtgcatcttgtgctttaatg
ttatctggcgcaccttttgaaggacctatcggtgcagttagagttgctaaagacgaaaac
ggtaacttaatcgctaacccaacacaccaacaagctgacaagtcagatttagatatcgtt
gttgctggtactcacgattcagttatcatggttgaagctggttgtaaatttgttactgaa
gacgatattatgaacgcagttgagtttgcgcaagttgaaatcaaaaaacaatgcgaagct
caagtagcatttgctaaagaatgtggcgttgaaaaagaagaatttgttaatccttacgac
acaacagaaatcaaaaaaataattgaagaaactgctcatgatatgatttttgatgcttat
cacaattttgacagagcgtacagacaagaaaaacttgaagaagctaaaaaacttgttaaa
gaaaaaattgatgctttgccggatgatgactatagcaaaaaaattatggaagaaacaggt
atcgacttcgttgcagaagaatttaaaaacgcagaaaaacatattatgcgtgcaatgatt
ttggatgaaggtgttagagctgacggcagaaaaccaacagaagttcgccctatttggtgt
gaagttggtgtattgcctagagcgcatggctcagcagtatttacaagaggccaaacacaa
gtattgtcagttgcaacattggctggacctggaatgaaacaagagctagacggtgttgac
cctcaaactgaaaaaacttatatgcacaaatacatctttcctggtttctcagttggtgaa
gttaaacctcttagaggacctggcagacgtgaagttggtcacggaaacttggcagaacgt
gctaatgttcctgcacttccttctcaagaagaatttggttatacaattcgtgtaacatct
gatgtattggagtcaaacggttctacatcaatggcatcaacttgcggttcttcaatggct
ttgatgaatgctggtgttcctgtaaaatgtatgattggtggcgttgcaatgggtatgatt
actgaaccaggtaaagaacctgttgtattgacagatattcaaggtattgaagattttctt
ggcgatatggacttcaaagttacaggtaatgacactggtatcactgctttacaaatggat
atgaaagcaaaaggtattgcaaatgatacattacgtcgtgctttggctcaagctaaagaa
ggtagattacacatcttgggtaaaatgagagaagttatctctgctccagcagatcacttg
tcaccatttgctccaagtatttctacaatgacaatttctacagaagatatcggaacagtt
attggacctggcggaaagcaaatcagagcaattattgacgcttctggtgctgaaattgat
attcaagattcaggtgtagtaacaattacatctaatgaccaagaaggtgcagaaatcgct
aagagaatgattaaggaattaacattcaagcctgaaccgggaatggttgtaaagggtaaa
gttgttagaattattcctatcggggcatttgtagaattagctcctggtaaagacggaatg
gttcacatttctcaagtttgcaacgaaagaattgaaacaattgaacctcatcttcaagta
ggtcaggaagttgttgttaaggttatcaaaatcgacgataaaggtagagttaacctaaca
ataaaaggtgtttctgacgaagaaaaagctcaattcaactaa
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