Candidatus Melainabacteria bacterium MEL.A1: BHV42_06340
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Entry
BHV42_06340 CDS
T04546
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mbf
Candidatus Melainabacteria bacterium MEL.A1
Pathway
mbf03420
Nucleotide excision repair
mbf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BHV42_06340
03430 Mismatch repair
BHV42_06340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbf03400
]
BHV42_06340
Enzymes [BR:
mbf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BHV42_06340
DNA repair and recombination proteins [BR:
mbf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BHV42_06340
MMR (mismatch excision repair)
Other MMR factors
BHV42_06340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
GpA_ATPase
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
AOR38851
LinkDB
All DBs
Position
1293395..1295929
Genome browser
AA seq
844 aa
AA seq
DB search
MENILDNLNKEQREAVETVRGPLLVLAGAGSGKTKLLTSRIAYLIQNGVRPRNILAVTFT
NKAAKEMKERLGNILGENVVKYMWVGTFHGICGRILRENIENYSFQSGKRLDKNFSIYDE
TDSNAVIKQAIKKLNLDDKVYAPKLVKTVISNAKNKMQDAYTFATFARDFKSQKIAQIYE
EYENSLNNNNAIDFDDMLMLTVKLLEQCKEVRQQYYDRFQHILVDEFQDTNMAQYKLINM
LYTNLEPDIPDERSLCVVGDVDQSIYSWRGADYTIILNFQKDFKKTKLIKLEQNYRSTAN
ILNVANAIIENNTERVDKVLYSQKGDGELIDYFEAQDEADEANFIASRIKQDSGGDYNRF
AILYRTNSQSRALEEACMAAGLPYKIYGGLKFYDRKEVKDIIAYLKLIYNTDDSQSFRRI
VNVPKRAIGDTTVKNLSDFADKEDISLFAACQRIEDAVEIPPRTRSKLKDFSELILKFVN
AKDSYSLQDFVTLVIEKTGYLAELQSQNTPESEADIENLQELVNVAGEFVPEEADNALGE
FLQQVALVSDLDGMEDISNNVTLMTLHSAKGLEFPIVFLAGCDEGVFPHQRTFNIPSEME
EERRLMYVGVTRAEEKLYLTSAKRRQMWGEYKYYNPSRFIDEIPPQLLNKIGFEGSTSGT
STFQNAVSRARTGKSDYSYSAAQSDSFGYVKPSSGFGKGFVAPTRGLATGKSHNDRQRQN
SSYSQQPHRTPSRTILVKSQANKQRDDEKIKEFFKDNAIKRMLEEKKQKERMQQAEDAER
QRRMETTTPIEYVFNVGERVFHDKLGIGHIQEVTQIGDSMMYTIDFGRQGVKAMDAAYAK
LKKF
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatatactggataatcttaacaaagaacaaagagaagctgtagaaactgtaaga
ggaccattgttggtactggcgggagcaggcagcggaaaaacgaaattacttacttcaaga
attgcgtatttaattcagaatggtgttagacctcgtaatattcttgccgttacatttacc
aacaaggcagcaaaagagatgaaagaacgtcttggtaatattttgggcgaaaacgttgta
aaatatatgtgggtcggtacttttcacggtatttgtggaagaattttgagagagaatatt
gaaaattatagttttcaatctggaaaaagattggataaaaatttctcaatttatgatgaa
acagattctaatgcggtaattaaacaggcaattaaaaagcttaatcttgatgataaagtt
tatgcaccaaaacttgtaaaaacagttatttctaatgctaaaaacaagatgcaggatgct
tatacttttgcaacttttgccagagattttaaatcacaaaaaattgctcaaatttatgaa
gagtacgaaaattctttgaataacaacaatgcaattgactttgatgatatgttaatgctt
acggtaaaacttcttgaacagtgcaaagaggttcggcaacagtattacgatagatttcaa
catattttggttgacgagtttcaggataccaatatggcgcaatataagcttattaatatg
ctttatacaaatctcgagcctgatattccggatgaacgttcattgtgtgttgtaggtgat
gttgaccagtcaatttatagttggcgtggtgcggattatacgattattttgaatttccaa
aaagatttcaaaaaaacaaaattaattaaacttgaacaaaattatcgttctaccgcaaac
attttgaatgtcgcaaacgcaatcattgagaacaatacagagcgtgtggacaaggttctt
tattcacaaaaaggtgatggcgaattaattgattattttgaggcgcaagatgaggcggat
gaagcaaactttattgcaagccgaattaaacaggattccggcggagattacaatagattt
gcaattctttatcgtacaaactcgcaatctcgtgcattagaagaagcttgtatggcggca
ggacttccgtataagatttatggcggtttaaaattctatgatcgtaaggaagttaaagat
attattgcatatttgaaattgatttataatacggatgattcacaaagtttcagaagaatt
gtaaatgttccgaaacgtgcaattggcgatactactgtaaaaaatctctctgattttgca
gataaagaagatatcagcctgtttgcagcttgtcaacgaattgaagatgcagttgaaatt
ccgcctagaactcgttcaaaattgaaagatttttcagaattgattttgaaatttgtaaac
gctaaagattcatattcattgcaagattttgtaactcttgttattgaaaagacaggatat
ttggcagaactgcaatctcaaaatacccctgaaagtgaagctgatattgaaaacttgcaa
gagttggttaacgtcgcaggggaatttgttcctgaagaagctgacaatgctttaggtgaa
tttttgcaacaagttgctttggtttctgaccttgacggaatggaagatatctcaaataat
gtaaccttgatgactttgcactctgcaaaaggtttggagttcccaatagtatttcttgcc
ggttgtgatgaaggtgtattcccgcatcagagaacatttaatatcccatcagaaatggaa
gaagaacgtcgcttgatgtatgttggagttactcgtgcggaggaaaaactttatcttaca
tcggcaaaacgccgtcaaatgtggggcgaatacaaatattacaatccatcaagatttatt
gatgaaattccgcctcaattgttgaataaaattgggtttgaaggttctacaagcggaact
tctacattccaaaatgcagtttcaagagcaagaacaggaaaatctgattattcatattct
gcagctcaatctgacagttttgggtatgtaaaaccgtcatctggctttggaaaaggtttt
gttgctccgacaagaggtttggctacaggaaaatctcataatgacagacaaaggcaaaat
tcaagttattctcaacaaccgcacagaactccatctcgcacgattttggttaaatctcaa
gccaataaacaacgtgatgatgaaaaaattaaagaattttttaaagataatgcgataaaa
agaatgcttgaagaaaaaaaacaaaaagagcgtatgcagcaggcagaagatgctgaacgt
caacgcagaatggaaactacaactccaatcgaatacgtttttaatgtcggagaaagagtt
tttcatgacaagttggggattgggcatattcaagaagttactcaaattggtgacagtatg
atgtacacaattgattttggcagacaaggtgtgaaagctatggatgccgcttatgcaaag
ttgaagaagttttaa
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