Methanoculleus bourgensis MS2: BN140_0181
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Entry
BN140_0181 CDS
T02189
Symbol
rpoB1
Name
(GenBank) DNA-directed RNA polymerase subunit B'
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
mbg
Methanoculleus bourgensis MS2
Pathway
mbg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mbg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BN140_0181 (rpoB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbg03021
]
BN140_0181 (rpoB1)
Enzymes [BR:
mbg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BN140_0181 (rpoB1)
Transcription machinery [BR:
mbg03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
BN140_0181 (rpoB1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Auto_anti-p27
Zn_ribbon_RPAB4
DUF1451
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
13353631
NCBI-ProteinID:
CCJ35104
UniProt:
I7LL67
LinkDB
All DBs
Position
172108..173922
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AA seq
604 aa
AA seq
DB search
MRQSRVFVDGALIGLVDDPRDLVSRMREIRRNGGLSTEVNVSYKDFNNDVIIHTDRGRAR
RPLIVVHDGKPEVTAEDIERIRNNEMTFEDLVQKGAVEFVDAEEEEDLFIAINESDLTPE
HTHLEIDPSLILGIGAAHVPFPEHNASPRVTMGAGMVKQALGFGAANMKLRPDTRGHMLH
YVQKPLTYTQTSDAIGSDERPAGQNFVVAILSYEGFNIEDALIINKASIDRGLGRSHFFR
TYDGEERRYPGGQVDRIEIPDEEVSGAHGAEYYANLDDDGIINPETVVHEKDVLIGKTSP
PRFLEEPTSELIAVEKRRDTSVTMRSNERGIVDTVIITEGENSSRLVKVRTRDLRVPEVG
DKFASRHGQKGVIGLIQPSADMPFTESGMTPDLIINPHAVPSRMTIGHMLEMLGGKVGSL
EGRRINATAFRGEREADLRRSLKELGFSHDGREVMYDGITGRRFAADIYIGVIYYQKLYH
MVSSKMHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDVMIGHGAAMALKERLLDESDK
VTQWVCAKCGMVAMLDRKRKITRCLACGSETDIYPVEMSYAFKLLLDEMKSMGIAPRLRL
DDMV
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagtcacgtgtcttcgttgacggggctcttatcgggctcgtggatgacccccgg
gacctggtcagccggatgcgagagatacgccggaatggcgggctctccaccgaggtcaac
gtctcctacaaggatttcaacaacgacgtcatcatccacaccgaccgcggaagagcacgc
agaccgctgatcgtggtccatgacggcaaaccggaggtgaccgcggaggatatcgaacgc
atccgcaacaatgagatgaccttcgaggatctggtgcagaagggtgccgttgagttcgtt
gatgccgaggaggaagaagacctcttcatcgccatcaacgaatcggacctcactcccgag
cacacgcacctggagatcgatccttcgcttatcctgggtatcggtgcggcgcatgttccc
ttccctgagcacaacgcgagcccccgtgtcaccatgggcgcagggatggtcaagcaggcg
cttgggttcggggcggcaaacatgaaactccgtcccgacacgcgggggcacatgctccac
tacgtccagaagccgctcacctacacccagacctccgatgcgatcgggtccgacgagcgc
ccggctggtcagaacttcgtcgttgcgatcctctcctacgaggggttcaacattgaagat
gcgctgatcatcaacaaggcctccatcgaccggggtcttgggcggtcgcacttcttccgc
acctacgacggcgaggagcggcgctaccccggcggccaggtcgaccggatcgagatccct
gacgaagaggtctccggcgcgcacggtgccgagtactacgcgaacttggacgatgatggc
atcatcaacccagagacagttgtccacgaaaaagacgtactgataggcaagacctcgccg
ccgaggttccttgaggagcctacgagcgagctcatcgccgtcgagaaacggcgcgacacc
tcggtcacgatgcggagcaacgagcgcgggatcgtggataccgtcattatcaccgagggc
gagaactcctcgcgtctcgtgaaggtccggacccgtgacctccgggttccggaggtgggc
gacaagttcgcgtcccggcacggtcagaagggcgttatcgggctcatccagccgtcggcg
gatatgccgttcacggagtcgggcatgacgcccgacctgatcatcaacccccacgcggtc
ccgagccgtatgaccatcgggcatatgctcgagatgctgggcggcaaggtcggctccctt
gagggtcgccggatcaacgcgaccgcattccgcggcgagcgtgaggcagacctccggaga
tcgctcaaggaacttgggttctctcacgatgggcgtgaagtgatgtacgatggtatcacc
ggccgccggtttgcggccgacatctacatcggcgtcatctactaccagaagctctaccac
atggtctcaagcaagatgcacgcgcggtctcgcggccccgtgcaggtgctcacccgccaa
ccgactgaaggacgtgcccgtgagggtggtcttcggttcggtgagatggagcgcgacgtg
atgattggtcatggtgcggctatggccttaaaagagcggctgcttgacgagtcagacaag
gtgacccagtgggtctgcgcaaagtgcggtatggtggcgatgcttgaccggaagagaaag
atcacgcggtgtcttgcctgcggcagcgagaccgatatctaccctgtcgagatgagttac
gccttcaagcttctcctcgatgagatgaagagcatgggtattgctccccgcctgagactc
gacgatatggtatga
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