Methanoculleus bourgensis MS2: BN140_0182
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Entry
BN140_0182 CDS
T02189
Symbol
rpoA1
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
mbg
Methanoculleus bourgensis MS2
Pathway
mbg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mbg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BN140_0182 (rpoA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbg03021
]
BN140_0182 (rpoA1)
Enzymes [BR:
mbg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BN140_0182 (rpoA1)
Transcription machinery [BR:
mbg03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
BN140_0182 (rpoA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-GeneID:
13353632
NCBI-ProteinID:
CCJ35105
UniProt:
I7KXE7
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All DBs
Position
173942..176590
Genome browser
AA seq
882 aa
AA seq
DB search
MTSPKRVGRIEFGLFSPKEIRKMSVRKIIWADTYDDDGFPYPQGLMDLHLGVIDPGLRCK
TCDQKAADCPGHFGHIELAKPVIHVGYTRLIRKLLRVTCRSCSRLLMTTEEVEKIVGPEE
SDLTVDVVSEKDVKKERICPHCGEQQLKINFEKPTTFSEVFVEDGRKVEHKLTPADIRAR
LEKIPDDDLRLMGVNPDVARPEWTILTVLPVPPVTMRPSIILENGQRSEDDLTHKLVDII
RINQRFKENQDAGAPQLIIEDLWELLQYHVTTYLDNEVAGCPPARHRSGRPLKTLSQRLK
GKEGRFRGSLSGKRVNFSARTVISPDPNLSIGEVGIPLAIANEMTVPVRITPFNIEEMRQ
YVLNGPVRPTIRSPCGANYVIRPDNRRMRLSDVNLETVMEMLEPGWTVERQLKDGDIVLF
NRQPSLHRMSIMAHRIVVMDGKTFRLNPAVCPPYNADFDGDEMNLHIPQTEEARAEAEIL
VSVQANILSPRTGGPIIGGIHDHISGIFLLTHRMRHFRKEDVLYLTQHLDLDHLPEPDSV
DSNGNLLWTNKQVFSLILPGELNMIFRASSCQNCETCRREMCENDAYVRIIDGQLVTGTI
DKKAIGAFDGQILHRIIRQYGMKRAARFIDDVTKLSIRGIMLQGFSFGIDDEDLTKTEYG
QIDEVLNGAVSDVERRIKIFKEGQLEPMPGRTLEETLEMQIMQVLGKARDRTGEIAGRHL
GMDNSAVVMAVSGARGSMLNLTQMAGCLGQQSVRGERIMRGYEDRTLPHFRRNELGAEAH
GFIANSYKSGLSPTEFFFHAIGGREGLVDTAVRTSQSGYLQRRMINALQDLKVAYDGTVR
TTGGRIIQFRYGEDGTDPARSSYGAPVDVKGIVESVLKEEVK
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtccaaaacgtgttggaaggatcgagttcgggctcttctccccgaaagagatc
cgcaaaatgagcgtccggaagatcatctgggcagacacctacgacgatgacgggttcccc
tacccgcagggcctgatggacctgcacctgggcgtcatcgaccccggtctccggtgtaag
acctgtgaccagaaggcggcagattgtccgggccacttcgggcatatcgagctcgcaaag
cctgtcatccatgtagggtatacccggctgatccggaaactcctgcgggtgacctgcagg
tcctgttcccggctgctgatgacgaccgaagaggtcgagaagatcgtcgggcctgaggag
agcgacctcaccgtggatgttgtctccgagaaagacgtcaagaaagaacggatctgtccc
cactgcggggaacagcagctcaagatcaacttcgagaaacccaccaccttctccgaggtc
ttcgtggaagacgggaggaaggtggagcacaaactgactcctgccgacatcagggcgcgt
cttgagaagatcccggacgacgacctgcggctgatgggggtcaaccctgacgtcgcgcgg
ccggagtggacgatccttacggttctcccggtcccgccggtcacgatgcgtccctcgatc
atcctcgagaacgggcagcggtccgaggatgacctgacccacaagcttgtggatatcatc
aggatcaaccagcggttcaaggagaaccaggatgccggcgctccccagttgatcatcgag
gacctctgggaactcctgcagtaccacgtcaccacctacctcgacaacgaggtggcgggg
tgcccgcccgcccggcaccggagcggtcggcccttaaagaccctctcgcagcggctcaaa
gggaaggaagggcggttccgtggttcgctctcagggaagcgtgtgaacttctccgcccgt
acggtgatctcgcccgacccgaacctctctatcggcgaggtcgggataccgcttgctatc
gcaaacgagatgaccgtcccggtcaggataaccccgttcaacatcgaggagatgcggcag
tacgtcttaaacggtcctgtacgtcctaccatcaggtcgccctgcggtgcaaactatgtc
atcaggcccgacaaccggaggatgcgtctttcggatgtaaacctggagacggtcatggag
atgctcgagccgggctggacggtggagcggcagttgaaggacggggatattgtcctcttc
aaccggcagccctcgctgcaccggatgagtatcatggcccaccgcattgtcgtgatggac
gggaagaccttccggctgaacccggcggtctgtcctccctacaacgccgacttcgatggc
gacgagatgaacctgcacatcccacagaccgaggaggcgcgggcggaggccgagatcctg
gtctcggtgcaggcaaacatcctctcgccgaggaccggcggtccgatcatcggcggcatc
cacgaccacatctcggggatcttcctcttaacgcacaggatgcgccacttccgaaaagag
gacgtgctctatctcacccagcacctcgacctcgaccacctgcctgagcctgattcggtg
gatagtaacgggaacctgctgtggaccaacaagcaggtcttctcgctcatccttcccgga
gaactgaacatgatcttccgcgcttcgtcgtgccagaactgtgagacctgccgacgtgag
atgtgcgagaacgatgcttacgttcggatcatcgacgggcagctggtcaccggcaccatc
gataagaaggcgatcggtgcgttcgacggccagatcctgcaccggatcatcaggcagtac
ggcatgaagcgggccgcccggttcatcgacgacgtgaccaaactctcgatccggggtatc
atgctccagggcttctcgtttggcatcgatgacgaagacctgaccaagaccgaatacggt
cagatcgatgaagtgctcaatggtgccgtcagcgacgtcgagcgccggatcaagatcttc
aaggaggggcagctcgaaccgatgccgggccggacactcgaggagacgcttgagatgcag
atcatgcaggtccttggcaaggcccgtgaccgcaccggtgagatcgccgggcggcacctt
gggatggataacagcgctgtggtgatggcggtctccggcgcccgtgggtcgatgctgaac
ctgacgcagatggccggttgtctcgggcagcagtcggttcgtggtgagcgaatcatgcgt
ggctacgaggaccggaccctgccgcatttccggcgcaacgagctcggtgcggaggcgcac
gggttcatcgccaacagttacaagagcggtctctccccgaccgagttcttcttccacgcc
atcggtgggcgtgagggtctcgtggacactgcggttcgtacatcgcagagtggctacctg
cagcggcggatgatcaatgccctgcaggatctcaaagtggcgtacgatggcaccgtccgg
acgacgggcggccggatcatccagttccgctacggcgaggacgggactgaccctgcaagg
agcagttacggcgccccggtggacgtgaaaggcatcgtggagagtgtcttaaaggaggag
gtcaaatga
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