Methanoculleus bourgensis MS2: BN140_0573
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Entry
BN140_0573 CDS
T02189
Name
(GenBank) mRNA degradation ribonucleases J1/J2
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mbg
Methanoculleus bourgensis MS2
Pathway
mbg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN140_0573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbg03019
]
BN140_0573
Messenger RNA biogenesis [BR:
mbg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BN140_0573
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GFIT
Motif
Pfam:
RNase_J_b_CASP
RMMBL
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
13354164
NCBI-ProteinID:
CCJ35496
UniProt:
I7KBM2
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All DBs
Position
complement(586003..587340)
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AA seq
445 aa
AA seq
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MDIEIIAVGGYNEVGRNMTAVRCGKEIVIFDMGLRLDQVMIHEDADIESMHSLDLIEMKA
IPDDTIMNSIEGSVKAIVCSHGHLDHIGAIPKLAHRYNAPIISTPYTSELIRQQIAGEQK
FGVNNKLFALKAGQRYTISPHLTLEFVRSQHSIIDTVFPVLHTPRGAIVYANDFKLDRTP
VLGEPPDFARLRQLGKEGVLALIVESTNISEKGRCPSEKIARDLVRDTITSYEDDKSAIF
VSTFSSHISRVKTIAECAHEIGRKPVLLGRSMERYSSAAEQLKLVGFPETLSMFGNRRTV
DRTLRRIMKTGKDKFLPIVTGHQGESGAILTRIVMGDTPYKLEKGDKILFSAKVIPNPMN
YGQRYLVEARARMAGVRIFDELHVSGHAYREDHYEFLHLLNPQHLIPAHGDIDMTGGYAK
FAEEIGYTLGDDLHVLRNGQKVLIK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggatattgagattatagcagtgggcggatataacgaagtcggcagaaatatgactgcc
gtccgctgcggaaaagagattgtcatctttgatatgggcctgcgtcttgatcaggtgatg
atccatgaggatgctgacattgagagcatgcattccctggacctgatcgagatgaaagcc
atccccgatgacacgatcatgaattcgattgaaggaagtgtcaaggcgatcgtctgttcg
cacgggcacctggaccatatcggtgcgataccaaaactggcgcaccgctataatgccccg
atcatcagcacgccctacacatcggaactgatcaggcaacagatcgcaggtgaacagaag
ttcggggtgaacaataaactcttcgccctgaaagcagggcagcgctacaccatctccccg
cacctcacgctcgagttcgtacggagccagcactccatcatcgataccgtcttcccggtc
ctgcacacaccaaggggcgcgatcgtctacgcaaatgacttcaaactggaccggacgccg
gtgctcggggagccgccggacttcgcccggttgaggcagctcgggaaggagggcgtgctt
gccctgatcgtcgagagcacaaacatcagcgagaaggggcgctgcccgagcgagaagatc
gcgcgggacttggtcagggacaccatcacgagttacgaggacgacaagagcgctatattt
gtctcgacgttctcgtcgcacatctcccgtgtcaagaccatcgccgagtgcgctcacgag
atcggcagaaaaccggtcctgctcgggcggtcgatggagcgctacagctcggctgccgag
cagctgaaactggtcgggttccctgagacgctctcaatgtttggcaaccggcggaccgtt
gaccggacgctgcggcggatcatgaagaccgggaaggataagttcctcccgatcgtcacc
ggccaccagggtgagtcaggggctatcctgacgaggatcgtgatgggggataccccgtac
aaactggagaagggcgacaagatcctcttctccgcgaaggtgatcccaaacccgatgaac
tacgggcagcgctaccttgtcgaggcccgcgccaggatggctggcgtgcggatctttgat
gaactgcacgtctcgggccacgcgtaccgggaggaccactacgagttcctgcacctctta
aacccacagcatcttatcccggcccatggtgacatcgacatgaccggcggctacgcgaag
tttgcagaggagatcgggtataccctcggggacgatctccatgtcctgcggaacgggcag
aaggttctgataaagtag
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