Methanoculleus bourgensis MS2: BN140_0762
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Entry
BN140_0762 CDS
T02189
Symbol
recJ3
Name
(GenBank) archaea-specific RecJ-like exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mbg
Methanoculleus bourgensis MS2
Pathway
mbg03410
Base excision repair
mbg03430
Mismatch repair
mbg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BN140_0762 (recJ3)
03430 Mismatch repair
BN140_0762 (recJ3)
03440 Homologous recombination
BN140_0762 (recJ3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbg03400
]
BN140_0762 (recJ3)
DNA repair and recombination proteins [BR:
mbg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BN140_0762 (recJ3)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BN140_0762 (recJ3)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BN140_0762 (recJ3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
Motif
Other DBs
NCBI-GeneID:
13354475
NCBI-ProteinID:
CCJ35685
UniProt:
I7KYE2
LinkDB
All DBs
Position
complement(796258..797661)
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AA seq
467 aa
AA seq
DB search
MEMGLKRDLRRAADTICEADRVTIVSHIDADGISTESILAQALSREGIPVSSVFVRQLEP
MAMRHIPKDDSLKLFTDLGAGQQNLLEEHGLSADEVLILDHHVSQPCGTAYPQVNCLDYG
VTRMSAAGVAYLVAKTIDPTSTDLAKLAVVGNVGDMMARENCGLVGPAREIVQDGVEYGN
IIVRERDLNCYGISTRPVHVCLGYCDDPYIDGISNSTNAALQFLERLGVELKNPQGGWLV
WEELTFDDRRKIVSALAQQLIAHGREIDRLLGETYIFPDETERTPLRNASEYATLLNACG
RWAKPKVGGSICRGERGDAYREAEYMLAHHRSVIRDLLQYILDTGVTELSHLQYIHTGDR
FPDTIVGIGAGMALSKLDWRKPIMVLAAMVDEPEVTKVSMRTNQWALARGVDLQEALVEA
SAGVGGAGGGHRIAAGAFIPRNTEEEFVDSVNRILKRQSAPAGQDDS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggagatgggcctaaagcgcgatctgcggagagcggctgatacgatctgcgaagcggac
cgggtgacgatcgtctcccacatcgacgccgacggaatcagcaccgagtcgattcttgcg
caggcgctcagccgtgagggcataccggtcagttcagtctttgtccgccagctcgagccg
atggcgatgcgccacatcccgaaggacgactccttaaaactcttcaccgaccttggggca
ggccagcagaatctcctcgaggagcacggtctctccgctgacgaggtcctgatactcgac
caccacgtcagccagccctgcggcacggcctaccctcaggtcaactgcctggactacggc
gttacccggatgagtgcggccggcgttgcatacctggtcgcaaagacgatcgatcccacc
agcaccgacctcgccaaactcgcagtggtcggaaacgtcggcgatatgatggcccgggag
aactgcgggctggtcggcccggcgcgggagatcgtccaggacggcgtggagtacggcaac
atcatcgtccgggaacgggacttaaactgctacgggatatccacccgccctgtccacgtc
tgcctcggctactgtgacgacccctacatcgacgggatctcaaacagcacaaacgcggcg
ctccagtttcttgagaggctcggtgttgagttaaagaacccgcagggcggctggctcgtc
tgggaggaactcacgttcgatgaccggcgcaagatcgtcagcgcccttgcccagcagctc
attgctcacgggagggagatcgaccgcctcctcggcgagacctacatcttccccgacgag
acggaacgcacaccgctcaggaacgcctccgaatacgccaccctgctcaacgcctgcggc
cgatgggcaaagccaaaggtcggaggcagcatctgccgcggggagcgcggggacgcttac
cgcgaggccgagtacatgctcgcccaccaccgctcggtcatccgcgacctgctccagtac
attctcgataccggggtgaccgaactctcccacctgcagtacatccacaccggcgaccgg
ttcccggataccatcgtcgggatcggcgccggtatggcgctctccaaactggactggagg
aaaccgatcatggtgctcgccgcgatggtggacgaaccggaggtcaccaaggtctcgatg
cggaccaaccagtgggcgctcgcgcggggcgtcgacctccaggaggcgctcgtcgaggcg
tcggcaggggtgggcggtgcaggcggcgggcaccggatcgcggccggggcgtttatcccc
cggaatacagaagaggagtttgttgatagtgtcaaccggatactcaaaagacagtctgct
ccggcgggtcaggacgatagctga
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