Methanoculleus bourgensis MS2: BN140_3010
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Entry
BN140_3010 CDS
T02189
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mbg
Methanoculleus bourgensis MS2
Brite
KEGG Orthology (KO) [BR:
mbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mbg03016
]
BN140_3010
Enzymes [BR:
mbg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BN140_3010
Transfer RNA biogenesis [BR:
mbg03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BN140_3010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-GeneID:
18506947
NCBI-ProteinID:
CDM26118
UniProt:
W6PPJ9
LinkDB
All DBs
Position
complement(338932..339471)
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AA seq
179 aa
AA seq
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MVRTFVAIDLPEEIRERVRKSQAILAQSGGRLALVDPANLHITLKFLGEVEPGKIGAIIE
ALRAVRAAPFELTVGCAACNSPRRPRVVWCDITDAGESAALARQVDDLLEPLGFPRERRP
FRPHATLARVKEFHPSLLRQVQCMPREPFGRFRVESIKLKKSTLTPRGSVYEDLVEVAL
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atggtcaggacgtttgttgcaatcgatctgcccgaagagatccgcgagagggtccgtaag
tcccaggcgatcctggcacagtcaggtgggcgtctcgcactcgtcgacccggcgaacctc
cacatcacgttaaagttcctcggggaggtcgaacccgggaagatcggggcgatcatcgag
gcgctccgggcggtcagggccgctcctttcgaactgacggtcgggtgtgcggcctgcaac
tccccgcggaggccgcgggtggtctggtgcgacatcaccgacgccggggagagcgccgcc
ctcgcccggcaggtggacgacctcctcgagccgctcgggttccccagggaacgccgccct
ttccggccccacgcaacgcttgcacgggtgaaggagttccacccttcgctcctccggcag
gtgcagtgcatgcctcgcgaaccgttcgggaggttccgggtggagagcatcaaactcaag
aagagcacgcttacgccccgcggatcggtctacgaggaccttgtggaggtagcgctttga
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