Microbacterium binotii: LXM64_01110
Help
Entry
LXM64_01110 CDS
T08238
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mbin
Microbacterium binotii
Brite
KEGG Orthology (KO) [BR:
mbin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbin03032
]
LXM64_01110
03400 DNA repair and recombination proteins [BR:
mbin03400
]
LXM64_01110
Enzymes [BR:
mbin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LXM64_01110
DNA replication proteins [BR:
mbin03032
]
Prokaryotic type
DNA Topoisomerases
LXM64_01110
DNA repair and recombination proteins [BR:
mbin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LXM64_01110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UIN30836
LinkDB
All DBs
Position
216709..217671
Genome browser
AA seq
320 aa
AA seq
DB search
MARLARVDPGSDAGISRTRSGTGFSYTRPDGTKVTTAERARIEALVIPPAWQDVWICAKD
NGHIQAVGTDDAGRRQYLYHADWSVKRDKGKYARALALAESLPRARGRVTAALRRADDSR
EAVLAAAFRMLDAGAIRIGSTKYLRRGGGRGLTTLQRRDVRVEAGVIELDFPAKSGVRAR
IRIEDEDLAVVLEQLTAGRPRSPLLAYRRGRRRVALTPGEVNAYIRVLTGGDFTAKDFRT
LRGTVTAAESLARLGHVESKKARKLAERDAVKATAAVLCNTPSVARSSYIDPRVWRAYAK
GRLLESGVSPETAIRRLVEG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcgactggcccgggtcgatcccggatcggacgcggggatctcccgcacgcgcagc
ggcacggggttcagctacacgcggcccgacggcacgaaggtcacgacggcggagcgtgct
cgcatcgaggccctcgtcatcccgccggcgtggcaggacgtgtggatctgtgcgaaggac
aacggtcacatccaggcggtcggcaccgacgacgccggtcgacggcagtacctgtaccac
gccgactggtcggtcaagcgggacaagggcaagtacgcgcgtgccctcgccctcgcggag
tcgctgccgcgcgcccgcggccgggtgacggcggcgctgcggcgagcggacgactcgcgc
gaggccgtgctcgccgccgcgttccggatgctggatgcgggagccatccggatcggctcc
acgaagtacctgcgccgcggcggcgggcggggcctcacgaccctgcagcggcgcgacgtc
cgcgtcgaggccggggtgatcgaactcgacttccccgcgaagagcggggtgcgcgcccgc
atccgcatcgaggacgaggacctggccgtcgtcctcgagcagctgacggcggggcgcccg
cgttcgccgctgctcgcctaccggcgcggtcgacggcgggtggctctcacgcccggcgag
gtgaacgcctacatccgtgtgctcaccggaggtgacttcaccgcgaaggacttccgcacg
ctgcggggcacggtcaccgcggcggagagcctggcgcgtctcgggcacgtggagtcgaag
aaggcgcgcaaactggcggaacgcgacgccgtgaaggcgaccgccgcggtgctgtgcaac
acgccgtccgtcgcgcgcagcagctacatcgatccgcgcgtgtggcgggcctatgccaag
gggcgcctgctggagtcgggcgtctcgcccgagaccgcgatccggcgtctcgtcgaaggc
tga
DBGET
integrated database retrieval system
