Microbacterium binotii: LXM64_06555
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Entry
LXM64_06555 CDS
T08238
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mbin
Microbacterium binotii
Pathway
mbin03420
Nucleotide excision repair
mbin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mbin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LXM64_06555
03430 Mismatch repair
LXM64_06555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbin03400
]
LXM64_06555
Enzymes [BR:
mbin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LXM64_06555
DNA repair and recombination proteins [BR:
mbin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LXM64_06555
MMR (mismatch excision repair)
Other MMR factors
LXM64_06555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
DUF6416
Motif
Other DBs
NCBI-ProteinID:
UIN31843
LinkDB
All DBs
Position
1301940..1305206
Genome browser
AA seq
1088 aa
AA seq
DB search
MTGLISAAAIAAALGQFPPTAEQSAVIESDLEPALVVAGAGSGKTETMAGRVVWLVANGL
VRRDQILGLTFTRKAAGELAERIQRRLARLAEFERRGLLGSLEDLHRRGELAGFGEIERS
GGSDDDRRRLLDRLAEERVVDAVPADDADDLLDRPTVSTYNSFADGIVREHAARIGRDAE
AVVLSESAAWLLMRRTVLASDDPELEATEESLRTLVDRALRIARDAVDNLVDLDDLERFP
ETFARVVDVPSENARTTVYKDVLDDVAAVGKLSLYARLAREYDQNKRRTGVIDFADQVAG
AYEIVRGDPRLVEELRDQYRVVLLDEYQDTSVVQSLLLSTLFADSAVMAVGDPHQAIYGW
RGASAGNLAGFAAAFSARDTCARFDLLTSWRNAPAVLRAATAVLAPLAERSAVAVGTLRA
RPGADDGRVEIVTEPDLESEADAVARWFAEVIRARGAEGRSTTGAVLFRAKKHMPRFAEA
LARHGIPHRVLGLGGLLSTPEIVDIVSALRVVSDPTQGSALIRLLSGPRWAIGLADLAAL
NDLAQRQVRAQAGGESEPDLLARLRQSARSETGSLIDALDLFARLRPDHAWFQTFTPAAR
DRLREAAAVFAGLRQVAATLPLTELVRAIEVELRLDIELAANESRGPARTAAAQVRAFVD
EVNAFLAADEHGSLTSLLAWLEHAERSDDLAPRTDPPESDVVQLLTIHGSKGLEWDAVAV
VRLVEGELPSTPKETRGWLGAGVLPYVFRGDSAWLPRYPWQGAESQQQLRDRRTAFVDAH
RDRALEEDRRLAYVAVTRARDHLLLSGSPWAGTTKPRELSRFTIEIAQALEQHDPRIDPG
ENPLADAARTLHWPLDALGSRRSRVTDAAAAVEAARVDPGDADDELALLLAERTERLRPA
RSGAPVRIPASAYKDFVTDYDAAVAALERPMPERPYRQTSLGTRFHAWVERRSGVSASVS
LDDPLWSAEVEQSGDDADFERLVEIFEASEWAMLQPIEVETEIDFRYIGIDDRPHVVVCK
LDAVYRRGDRIEIVDWKTGRAPRSESERRERLVQLELYRQAYHARHGVPVEQIDVALYYV
ADDLVIRD
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgggctgatcagcgcggcggcgatcgccgccgcgctcgggcagttcccgcccacg
gccgagcagtcggcggtgatcgagtccgatctcgaaccggcgctcgtggtcgcgggagcc
ggcagcggcaagaccgagacgatggccggccgcgtcgtgtggctcgtggcgaacggtctc
gtccgccgcgaccagatcctggggctcactttcacccgcaaagcggcgggagagctcgct
gagcgcatccagcgtcgcctggcgcgtctcgcggagttcgagcggcgcggacttctcggc
agcctcgaggatctccaccgtcgcggcgagttggcgggtttcggtgagatcgagcgttcg
ggcggatccgacgacgatcgacgcaggcttctggatcgtctcgccgaggagcgcgtcgtc
gacgcggtgcccgccgacgacgcagacgatctgctcgaccggccgacggtctcgacgtac
aacagcttcgccgacggcatcgtccgcgaacacgcggcccgcatcgggcgcgacgcggaa
gccgtcgtgctgtccgagtccgccgcctggctgctgatgcgccgcacggtgctcgcctcg
gacgacccggagctcgaggcgacggaggagtcgctgcggaccctcgtcgatcgtgcgctg
cgcatcgcgcgcgacgccgtcgacaacctcgtcgatctcgacgacctcgagcgattcccc
gagacgttcgcgcgcgtcgtcgacgtcccgtcggagaacgcgcgcaccacggtctacaag
gacgtgctggacgacgtcgccgcggtcggcaagctctcgctctacgcacgcctcgcccgt
gagtacgaccagaacaagcgccggaccggggtgatcgacttcgcggatcaggtggccggg
gcctacgagatcgtgcgaggcgatccgcgactggtcgaagagctgcgcgaccagtaccgc
gtggtgctgttggacgagtatcaggacacctcggtggtgcagagtctgctgctctcgacc
ctgttcgcggattctgcggtgatggcggtcggagaccctcaccaggcgatctacggatgg
cgtggtgcgagcgccggcaacctggcgggtttcgccgcggcattctcggcccgcgacacg
tgcgctcgattcgacctgctcacgagctggcgaaacgctccggcagtgctccgcgcggcc
accgccgtgctggcgccgctcgccgaacgcagcgccgtcgcggtgggcaccctgcgcgcg
agacccggcgccgacgacgggcgggtcgagatcgtgacggagcccgacctcgagagcgag
gcggatgcggtcgcgcgctggttcgccgaggtcatccgcgcgcgcggtgccgaggggcgc
tcgacgacgggcgccgtgctcttccgtgccaagaagcacatgccgcgattcgccgaggcg
ctggcacgtcacggcatcccgcatcgcgttctcggcctcggcggactgctgagcacgccc
gagatcgtcgacatcgtcagcgccctgcgcgtcgtcagcgatcctacgcagggctccgcc
ctcattcgtctgctgagcggtccgcgatgggcgatcgggctggcggatctggccgcgctg
aacgatctcgcccagcgccaggtgcgtgcgcaggccggcggcgagagcgagccggaccta
ctggcgcggctgcgtcagagcgcgcgcagcgagaccgggtcgctcatcgacgccctcgat
ctgttcgcgaggctccgcccagaccacgcctggttccagacgttcacccctgccgcgcgg
gatcgactacgggaggcggcggcggtattcgccgggctccggcaggtggcagcgaccctg
cccctgacggagcttgtgcgggcgatcgaggtggagctgcggctggacatcgaactcgcc
gccaacgagagccgcgggccggcgcgcacggctgccgcccaggtgcgggcgttcgtcgac
gaggtcaacgcattcctcgccgccgacgaacacggctctctgacgagcctgctggcctgg
ctcgagcacgctgagcgcagcgacgacctggcgccgaggaccgatccaccggagtcggac
gtggtgcagctgctgaccatccacggctcgaaggggctggagtgggatgcggtcgccgtc
gtccggctcgtcgagggcgagctgccgtccacgccgaaggagacgcggggctggctcggc
gcgggggtcctgccctacgtcttccggggggactccgcgtggctgccgcggtatccgtgg
cagggtgccgagagtcagcagcagttgcgtgatcgccgcacggcgttcgtcgacgcccac
cgggaccgcgcactcgaagaggatcggcgtctcgcgtacgtggccgtcacgcgtgcccgc
gaccacctgctgctgagcggatcgccctgggcgggaacgacgaagccacgggagctgagc
cggttcacgatcgagatcgcgcaggcgctcgagcagcacgatccccgcatcgatccggga
gagaacccgctggcggatgcggctcgcacgctgcactggccgctcgacgccctggggtcg
cgcaggtcgcgggtcaccgatgccgccgccgcggtggaggccgcgcgcgtggatccgggt
gatgcggacgacgagctcgccctgctgctcgccgagcgcaccgaacgtctgcggccggcc
cggtccggcgccccggtgcgcatcccggcatccgcgtacaaggacttcgtcaccgattac
gacgccgccgtcgcggcgctcgagcgccccatgccggagcggccctatcgacagacctcg
ctcggcacgcggttccacgcgtgggtggagcgtcgttccggggtgagtgcctccgtctcg
ctcgacgacccgctgtggtcggccgaggtcgagcagagcggcgacgacgcggacttcgag
cgtctcgtcgagatcttcgaggcgagcgaatgggcgatgctgcagccgatcgaggtcgag
acggagatcgacttccgctacatcggcatcgacgaccggccccatgtcgtggtgtgcaag
ctggacgccgtctaccgcaggggcgatcgcatcgagatcgtcgactggaagaccggtcgt
gctccgcgctcggagtccgagcgccgggagcgtctcgtacagctcgagctgtaccgccag
gcctatcacgccaggcacggcgtgccggtcgagcagatcgacgtcgcgctctactacgtc
gccgacgacctggtcatccgcgactga
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