Microbacterium binotii: LXM64_12335
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Entry
LXM64_12335 CDS
T08238
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mbin
Microbacterium binotii
Pathway
mbin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mbin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LXM64_12335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbin03400
]
LXM64_12335
Enzymes [BR:
mbin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LXM64_12335
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LXM64_12335
DNA repair and recombination proteins [BR:
mbin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LXM64_12335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
UIN29925
LinkDB
All DBs
Position
2494646..2495509
Genome browser
AA seq
287 aa
AA seq
DB search
MPEMPEVQGLVDFLGARLTALEITQARVSAISALKTYDPPIDALVGAHVASVARRGKFVD
IATDAGAHLVFHLAKAGWLRWHDTLPTTVIKPGRSPIALRVGFADGSGFDLTEAGTKKSL
AVWVVRDPADVPGVARLGPDPLEPAFTRDALAALLAGRRTQIKGVLRDQSIIAGIGNAYS
DEILHVARLSPYALAATLDAAEIDTLHTATIDTLRDAVEAASGRPPAELKDAKRRGMRVH
GRKGEACPVCGDIVRSVFFADNSLEYCATCQTGGKVLADRRLSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagatgccggaggtccagggactcgtcgacttcctcggcgcgcgcctgaccgct
ctggagatcactcaggcacgggtcagcgcgatctcggcgctgaagacctacgacccgccg
atcgacgccctcgtcggtgcccacgtcgcatcggtcgcccgccgcggcaagttcgtcgac
atcgcgacggatgccggagcgcacctcgtgttccatctcgcgaaggcgggctggctgcgc
tggcacgacaccctgccgacgacagtgatcaaaccgggccgctcccccatcgcactgcgg
gtgggcttcgccgacggttcggggttcgatctgaccgaagcgggaaccaagaagtcgctc
gccgtgtgggtggtgcgcgaccccgctgatgtccccggcgtcgcccggctcggtccggac
ccgctggagcccgccttcacgcgcgacgccctggcggcgcttctcgcgggacgccgcacg
cagatcaagggggtcctgcgggatcaatcgatcatcgccgggatcggcaacgcctactcc
gacgagattctccatgtcgcccggctctcgccgtacgcgttggcagccacgctcgacgcc
gccgagatcgacaccctgcacaccgcgacgatcgacacgctgcgcgatgcggtcgaggcc
gcatccggcaggcctcccgccgagctgaaagacgcgaagcggcgcgggatgcgggtgcac
ggccgcaagggcgaggcgtgccccgtgtgcggcgacatcgtgcggtcggtgttcttcgcc
gacaactcgctcgagtactgcgccacgtgccagaccggcggcaaggtactggcggatcgg
cggctgtcgcgtctgctgaaatga
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