Candidatus Izimoplasma sp. HR1: KQ51_00105
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Entry
KQ51_00105 CDS
T03291
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mbj
Candidatus Izimoplasma sp. HR1
Brite
KEGG Orthology (KO) [BR:
mbj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbj03032
]
KQ51_00105 (topA)
03400 DNA repair and recombination proteins [BR:
mbj03400
]
KQ51_00105 (topA)
Enzymes [BR:
mbj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KQ51_00105 (topA)
DNA replication proteins [BR:
mbj03032
]
Prokaryotic type
DNA Topoisomerases
KQ51_00105 (topA)
DNA repair and recombination proteins [BR:
mbj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KQ51_00105 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF
Toprim_4
Zn_ribbon_PaaD
NYD-SP28
MqsA_antitoxin
VP_N-CPKC
Ogr_Delta
Motif
Other DBs
NCBI-ProteinID:
AIO18009
UniProt:
A0A088TKF3
LinkDB
All DBs
Position
complement(94782..96842)
Genome browser
AA seq
686 aa
AA seq
DB search
MKKLVIVESPSKSKTIEQYLGSDYRVLSSKGHIRDLAISGVGGLGLDIENNFTPKYEIIK
EKKKVVSELKKALKEADEVYLATDPDREGEAISWHLKETLSIGERPYKRVIFNEITRERV
LDAFNHPRDIDFDLVSSQETRRILDRIIGFKLSKLLQNKIKSKSAGRVQSATLKIIVDKE
KEIDAFVEEEYWNVTAKFKEFDAELSKFKNKKVALGNEQETDELLASLKEEFTVANVEEK
ERNRDTKLPFTTSSLQQEASTKLNFSSQKTMLIAQRLYEGIDLENETVGLITYMRTDSTR
LSDTFSYPAIKFIEETYGAEYKGFVRKSKKTKNVQDAHEAVRPSSIYNTPEKLKKYLTKD
EFNLYKLIYNRAIASLMKAARIRVKNVLFENNEAHFKATAQELVFDGYLKVYTYESVSTS
ELPDLTVGASLKPESVEKKQNFTKPPLRFSEARLIKEMEEQGIGRPSTYSQTITTLKKRK
YVNLKEKKFIPTDQGKLTIEKLDEFFAQIISVDYTARMEKVLDDISTGNEEQTKIVSSFY
TSFIPMVENANKNMEKLAPKFTGEDCPKCSSPMVFRNSRYGTFEACSNYPACKHIKTKDV
ERVQPVTTGVKCPKCGKGEIVERTAKKGKNNGKKFYACDNFPRCKNMLFGKPTGELCPKC
GSLLITDKEDNVICQNTKECGYQKPE
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattagtaattgtggaatcacctagtaaatcaaaaacaattgaacagtaccta
ggtagtgactacagagtattatcatctaaaggacatattcgtgatttagctataagtgga
gtaggtgggcttggtttagatatcgagaacaatttcactccaaagtatgaaattattaag
gaaaagaaaaaagtagtatcagaacttaagaaagctttaaaagaggctgacgaagtttat
cttgctaccgaccctgatagggaaggtgaagcaattagctggcacttaaaagaaacttta
agtattggtgagagaccttataaacgtgtaatctttaatgagattacaagagaaagagtc
ttagatgcttttaaccatcctcgtgatatcgattttgatcttgtgtcttctcaagagaca
agaagaatcttagatagaattattggttttaaacttagtaagttactacaaaataaaata
aaatctaaatctgcaggtcgtgttcaatcagctactttaaaaattattgttgataaagaa
aaagagattgacgcatttgttgaagaagagtattggaatgttacagctaaattcaaagaa
tttgatgctgaactttctaaattcaaaaacaaaaaagttgctcttggaaatgaacaagaa
acagatgaattactagcttcattaaaagaagaattcactgtagctaatgttgaagaaaaa
gaaagaaatagagatactaaattacctttcactacttcaagcttacaacaggaagcttca
actaaattaaactttagttcacaaaaaacaatgttaattgcccaaagattatatgaaggt
attgatttagaaaatgaaactgtcggtttaataacttatatgcgtactgatagtacaaga
ctaagtgatacatttagttatccagcaattaagtttattgaagaaacttatggtgcagaa
tataaaggttttgttagaaaatctaaaaaaactaaaaatgttcaagatgctcatgaggca
gtgagaccttcatcaatttataatactcctgaaaaacttaagaagtatttaacaaaagat
gaatttaacttatataaactaatctataatagagctatcgcttcattaatgaaagcagca
agaattagagtgaaaaatgttttatttgagaataacgaagctcatttcaaagcaacagct
caagaattagtatttgatggttacttaaaagtttatacttatgaatcagtttctacttca
gaattacctgacttaactgtaggtgcttctttgaaaccagaatctgttgaaaagaaacaa
aactttacaaaaccaccacttagattctcagaagcacgtttgattaaagagatggaagaa
caaggtattggtcgtccatcaacttattctcaaacaatcacaactttaaagaaacgtaaa
tacgttaaccttaaagagaaaaaatttatcccaacagatcaagggaaactaacaattgaa
aaattagatgaattctttgcacaaatcatttcagtagattatacagctcgtatggaaaaa
gtattagatgatatttctacaggtaatgaagagcaaactaaaatagtatcatcattctat
acatcatttattcctatggtagagaatgctaataagaatatggaaaaattagctcctaag
tttactggagaagattgtccaaaatgtagtagtccaatggtctttagaaactcacgatat
ggtacctttgaagcttgtagtaattacccagcttgtaaacatattaagactaaagatgta
gagcgagtacaaccggtaactacaggggttaaatgtcctaagtgtggtaaaggtgaaatc
gttgaaagaactgctaaaaaaggtaagaacaatggtaagaaattctacgcttgtgataac
ttcccaagatgtaagaatatgctctttggaaaaccaacaggagaactgtgtcctaaatgt
ggtagtttactaattactgacaaagaagataatgttatctgtcaaaatactaaagaatgt
ggataccaaaaaccagaataa
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