Candidatus Izimaplasma bacterium HR1: KQ51_00196
Help
Entry
KQ51_00196 CDS
T03291
Symbol
truA_1
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mbj
Candidatus Izimaplasma bacterium HR1
Brite
KEGG Orthology (KO) [BR:
mbj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mbj03016
]
KQ51_00196 (truA_1)
Enzymes [BR:
mbj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
KQ51_00196 (truA_1)
Transfer RNA biogenesis [BR:
mbj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KQ51_00196 (truA_1)
Prokaryotic type
KQ51_00196 (truA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
RTP1_C1
Motif
Other DBs
NCBI-ProteinID:
AIO18099
UniProt:
A0A088TKN4
LinkDB
All DBs
Position
complement(188429..189451)
Genome browser
AA seq
340 aa
AA seq
DB search
MIDLIKKYYQAWETSNIELLNDVIHQKIYGVRTFNEDKFFTNEELLNNFLTNTLNTIKIA
SYNTLNDTTILELMINQKPVIAKITTKENRIYKVYEILKTDKRRIKCICLYDGSSYSGYQ
KQLNAESIQGTIEATLKQIFKEDIPIHSSGRTDKGVHALNQVFHFDINSSIKVENIKKVL
NSYLPDSIYIKTTEEVDFTFHSRYDVLVKKYQYKINTGEFNPIQRNYEWTINDFDITKFN
TQLQSVIGTHDFASFTKKTDQSTVRTIHNAYLEHKDNYVYINIEGNGFLRYMVRNIVGAI
IAINKGKLKYSVKELLELKDVTLIKDKAPSCGLYLYNVKY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgatagatttaatcaaaaaatattatcaagcctgggaaacaagtaatatagagttatta
aatgatgttattcatcaaaagatatacggagttagaacatttaatgaagacaagttcttt
actaatgaggaactacttaataacttcctgacaaacaccctgaataccattaaaatagct
tcatataacaccttgaatgatacaacaatattagaactaatgattaatcaaaagcctgtc
atagctaaaataactactaaagaaaatagaatatataaagtgtatgaaatattaaagaca
gataaaagaagaattaaatgtatttgcttatatgatggtagttcttattccgggtatcaa
aagcaattaaacgctgaaagtatccaaggaacaattgaagcaactttaaaacagatcttt
aaagaagatataccaatccattcaagtggacggacagataaaggtgttcatgccttaaac
caagtatttcattttgatataaactcttccattaaagtagagaatatcaaaaaagtactt
aactcatacttacctgattcaatttacattaaaacaactgaggaagtagattttacattc
cacagtcgttatgatgtactagttaaaaagtaccaatacaaaattaacacaggtgaattt
aatcctattcaaagaaactatgaatggacaataaatgactttgatataaccaagtttaac
actcaactgcaaagtgttattgggactcatgatttcgcttcatttacaaaaaagacagat
caatcaactgtcagaacgattcacaatgcatacttagaacataaagataattatgtctat
atcaatattgaaggaaatggattcctaagatatatggttagaaacattgtaggagcaata
attgctattaataagggtaaactcaaatactctgttaaagaattactagagttaaaagat
gttacacttattaaagataaagcgccatcttgtggtttgtatttatataatgtaaaatat
taa
DBGET
integrated database retrieval system
