Candidatus Izimoplasma sp. HR1: KQ51_00457
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Entry
KQ51_00457 CDS
T03291
Symbol
pcrA_1
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mbj
Candidatus Izimoplasma sp. HR1
Pathway
mbj03420
Nucleotide excision repair
mbj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mbj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KQ51_00457 (pcrA_1)
03430 Mismatch repair
KQ51_00457 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbj03400
]
KQ51_00457 (pcrA_1)
Enzymes [BR:
mbj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KQ51_00457 (pcrA_1)
DNA repair and recombination proteins [BR:
mbj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KQ51_00457 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
KQ51_00457 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
AAA_12
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
AIO18345
LinkDB
All DBs
Position
442709..444880
Genome browser
AA seq
723 aa
AA seq
DB search
MNNLLDNLNEKQKEAVLTTEGPIMAIAGAGSGKTSVLTKRIAYLIYEKNVHYKNILAITF
TNKAAKEMKQRVKTLLGINPYDMWISTFHSMCAKILRDHIEKLGYKRNFQIIDDDDNLQI
VKSLMKKANIDIKVYKPRVVRGLVLKMKFDEDYIDDIESPLKEFVGRIFKQYQDYIFESN
LVDFEDLMILTIKLLKQEPEVKKYYNDLFKYVLVDEFQDTNNIQYELVKLLVNEDKNLFI
VGDEDQSIYAFRGANIENINKFKRDYKGYHIVLLEQNYRSSNNILDAANSIIKNNSTRIP
KNLFSSKGAGELITHYKGVTARDEVEYVAQTIRALNRMGYNFNDMAILYRANSTSRQYED
ILLQKQIPYRIFGNTSFFKRKEIKDFTAYLKFILNQDDAFSFLRVISAPRRGIGPSTIEK
ITTYAVDNGLTFSDSLKQSHEYLGRNASNKLKEFITLIEHFRTQLDEIPFIDFVDYVLEK
SGYYQTLENDEKGDVRYENLQEFKTILAENNEIYGDISKVEMLTFILEDISLKADENKED
VEDGVTLMTLHAAKGLEFKVVFIVALEMGMFPLARTFGDKFEFEEERRLMYVGVTRAKER
LFLTNADVRQTFGEISRNPNSKFLDEIPSELIEKQGYSVAVSRSINVNSINKRPTYRDNI
IKKRKVSLENANQNDISKGDKVTHKVFGDGVVVSVAGDNCIIAFKHPHGVKKLLKDHPAI
SKK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaataatttactagataatttaaatgagaagcaaaaagaagcagtcctaacaacagag
ggtccaatcatggcgatagccggagctggaagcggtaaaacaagcgttcttacaaaaagg
atcgcttatttaatctatgagaagaatgttcattataaaaacattctagctatcaccttt
actaataaagctgcgaaagagatgaaacaacgagtaaaaacgttacttggaataaatcct
tatgatatgtggattagcacatttcattcaatgtgtgcaaaaatattacgcgatcatatt
gaaaaattagggtataaaagaaacttccaaattatagatgatgatgacaaccttcaaatt
gttaaatcattgatgaaaaaggctaatatagatataaaagtatataaacccagagttgtc
agaggtttagttttaaaaatgaagtttgatgaagattatatagatgatatagaatctcct
ttaaaagagtttgtaggtagaatatttaagcaatatcaagactatattttcgaatcaaac
ttagttgattttgaggacttgatgattttgacaattaagttattaaaacaagaacccgaa
gtaaaaaaatactataacgatttattcaagtacgttttagtggatgagttccaagatact
aataatattcagtatgaactagttaaattgcttgttaacgaggataagaacttatttata
gttggagatgaggatcaaagtatttatgcctttagaggggcaaatattgagaatattaac
aaattcaaaagagactacaaaggttatcatattgttcttttagaacaaaactatcgtagt
tcaaataatattttggatgctgctaacagcattatcaaaaataatagtacgaggatacct
aaaaatcttttctcatcgaaaggcgcaggagaattaattactcattataaaggggtaact
gcacgcgatgaagtagaatacgttgctcaaacaattagagctttaaatagaatgggttat
aactttaatgatatggctattttatatcgtgcaaatagtacctctagacaatatgaagat
atattattgcaaaaacaaattccttatcgtatctttgggaatactagtttctttaaaaga
aaagagattaaagatttcacagcatacctaaaatttattctaaatcaagatgatgctttt
agttttctaagagtaataagcgcaccaagaagaggaataggaccatcaacaatagaaaaa
atcactacttatgctgtagataatggtttgacttttagtgattcattaaagcaaagccat
gaatatcttggtagaaatgctagtaataaactaaaagaatttattacattgatagaacac
ttcagaactcaactggatgaaataccttttattgattttgtcgactatgttttagaaaaa
tcaggatactatcaaaccttggaaaatgatgaaaaaggtgacgttagatatgaaaactta
caagaatttaagacgatcttagccgaaaataacgaaatatatggcgatatatctaaagtt
gagatgttgacttttatattggaagatatttctttgaaagcagatgaaaataaagaagat
gtcgaggacggtgtaacgttaatgacacttcatgctgcgaaagggttagagtttaaagtt
gtatttattgttgctcttgaaatggggatgttccctttagcaagaacatttggcgataaa
tttgaatttgaagaagaacgtagacttatgtatgtaggagtaactagagctaaggaacga
ttattcttaacaaatgctgatgttagacaaacatttggggagataagtagaaatccgaat
agcaagtttctggatgagattcctagtgaattaattgagaaacaaggatacagtgttgct
gttagtagatcgattaatgttaattcaataaacaaaagacctacttatagagataatata
ataaagaaaagaaaagtatcactagaaaatgcgaatcaaaatgatatttcaaaaggtgac
aaagtaactcataaagtatttggtgatggagtagtagtgagtgttgcaggagataactgc
attatcgcctttaaacaccctcatggagtgaaaaaacttcttaaagatcatccagcaata
agcaagaaataa
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