Candidatus Izimoplasma sp. HR1: KQ51_00552
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Entry
KQ51_00552 CDS
T03291
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mbj
Candidatus Izimoplasma sp. HR1
Pathway
mbj03030
DNA replication
mbj03430
Mismatch repair
mbj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KQ51_00552 (dnaE)
03430 Mismatch repair
KQ51_00552 (dnaE)
03440 Homologous recombination
KQ51_00552 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbj03032
]
KQ51_00552 (dnaE)
03400 DNA repair and recombination proteins [BR:
mbj03400
]
KQ51_00552 (dnaE)
Enzymes [BR:
mbj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KQ51_00552 (dnaE)
DNA replication proteins [BR:
mbj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KQ51_00552 (dnaE)
DNA repair and recombination proteins [BR:
mbj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KQ51_00552 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
tRNA_anti_2
Phage_int_SAM_6
Motif
Other DBs
NCBI-ProteinID:
AIO18432
UniProt:
A0A088T2V1
LinkDB
All DBs
Position
533033..536056
Genome browser
AA seq
1007 aa
AA seq
DB search
MAFTHLYVETNYALNGSNIRINELVKRAVSYGYTSLAITDPKMHGTIKFYKACKANNINP
VIGLSAIVEGLNSTAKNKVVFLAKSNEGYQNLLKISSIYSLNKIISLSEIKANIKGLITI
IISDESELYNAYSNKQANTIREFKELLNNCFDEYYLSISSNESFNTDLSKMFNFVVLPKV
SLLDDEDREIHKLLSKVFNIDESNLLGELNDELLKRPEEVEKDYSQYKQALNNTTKIADS
CKITIDFSTTHLPKYKLKDNIKAKEYLHALVFKGLDKRVRGLKIDKNKYIDRLNYELRVI
DEMGYNDYFLIVWDFVKYAKQNKYLVGPGRGSAAASLVSYCLGITSVDSIAHELVFERFL
NPERITLPDIDMDLPDDKRDDVIKYVRDFYGVEKVASICTFGTFKSKSAIRDTARVIDFE
GVLLTQLTKESDKYNSITDMVENSETVKNIISQNKDAKNLLYLASKLEGLLRHVSTHAAG
IIVTGDDMTNHTPIQVGLLDMIQTQYEAKDLEDLGLLKIDFLGLRNLSSIDKICQLISYK
EKKNIDIYKVPLNDQKTFDLLKRTETTGIFQLESRGMRSLIGQMQIDSFEDIVTILALFR
PGPMENIPSYIRRRNNLEKITYPHKILEDVLKSTNGIIIYQEQIIQIASLFAGYSLGEAD
VLRRAVSKKSEKILHEERANFVKKAKELNRDEKTSNEIYDYIVKFANYGFNKAHSVAYAM
VSYWMAYLKANYPKYFISILTTSVIGSEAMMKEYIFEANKIGVKILPPSINKSNHIFNPE
NNNLRFPLLGIKNLGRNTVRDLVEVRKDGAFENYFDFVRRCHKTLNKRVIESLIYAGALD
EFGYSKHTMIDQLDEVINFSLYGDFIKQDEFVIENLEEYSYEVLKEKEKSILGFNLFVNP
LTNFEEYIKKHKLLVPSDINEEYINREIRMVAVLSKVRQIKTKNNKEMAFITVDDEAKKL
NGVLFTSTYQKFKDKLIKGEVYLLKGKIDNRNNEIQLIVNNLLKLDK
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggcatttacacacttatacgtagaaacaaactatgcgttgaacggatccaatattcgg
ataaatgaattagtaaaaagagctgtatcctatggatacacttctttagctataactgat
cctaaaatgcatggtactatcaagttctataaagcgtgtaaagcgaacaacattaatcca
gttatcggtttaagtgcaatagtagaaggtttaaattctactgcaaagaataaagtggtt
tttctagctaaaagcaatgaagggtatcaaaatctattgaaaatatcatcaatatatagt
ttgaataagataatcagtttatcggagattaaagccaatataaaaggtttaattaccata
ataattagtgatgaaagtgaactatataatgcatatagtaataagcaagctaacacaata
agagaatttaaagagttactaaataactgtttcgatgagtattacttatcaattagtagt
aatgaatcatttaatactgatttaagtaagatgtttaatttcgttgtgttacctaaagtt
agtcttcttgatgatgaggatagagaaatacataaattattgagtaaagttttcaatatt
gatgaaagtaatcttttaggtgaactgaatgatgagttattaaaaagaccagaagaagtt
gagaaagattactcacagtataaacaagctttaaacaatacaacaaaaattgcagattca
tgcaaaataacaattgatttttcaacgactcatctacctaaatataaattaaaagataat
attaaagctaaagagtatttacatgctcttgtttttaaaggtttggataaacgagttaga
ggattaaaaatagataagaataaatatattgatagactaaactatgaacttagagttatt
gatgaaatgggatataatgattactttttaatcgtttgggattttgttaaatatgccaaa
caaaacaaatacttagtaggaccaggacgtggtagtgctgctgctagtttagtgtcttat
tgtttaggaataacctcggtagattcgattgcccatgaacttgtattcgaaagattcttg
aacccagagcgtataactttgccagatatcgatatggatttaccagatgataaaagagat
gatgttatcaaatatgtaagagatttttacggtgttgagaaagtagcttctatatgtacc
ttcggtacttttaaatcaaaatcagccataagagatactgcaagagttattgattttgaa
ggagttcttttaacccaactaactaaagaatctgacaaatataattctattactgatatg
gtagaaaattctgaaacagttaaaaatataatcagtcaaaataaagacgctaaaaacctt
ctatatttggcttctaagctagaaggactattaagacatgtgtcaactcatgcagcagga
ataatagttactggagatgatatgactaatcatacgccaattcaagttggactgttagac
atgattcaaactcaatatgaagcgaaagatctagaagatttaggtcttcttaaaattgat
ttcttaggacttagaaacttatcaagtattgataagatatgccagttaattagttataaa
gagaaaaagaatatagatatctacaaagttccactaaacgatcaaaagacttttgatttg
ttaaaaaggactgaaacaacgggtatcttccaattagaatctcgcggaatgagaagtcta
attggccaaatgcaaattgattcatttgaagatatagtaactatcctggctttatttaga
ccaggaccaatggagaatattccttcttatattagaagaagaaataacttagaaaagatt
acttatccccacaaaatattagaagatgttctaaaatcaacaaatgggattattatttac
caagagcaaattattcaaattgcaagtctgtttgctggatattcacttggagaagctgat
gttttaagaagagcagttagtaaaaagtcagaaaagatactacatgaagaacgtgctaat
tttgttaaaaaggcaaaagagttaaatcgagatgaaaaaacaagtaatgaaatatatgat
tatatagttaagtttgcaaactacggttttaataaagctcatagcgttgcatacgctatg
gtttcatactggatggcttatcttaaagcaaattatcctaagtattttattagcattttg
actacaagcgttattggttcagaagcaatgatgaaagaatatatctttgaagctaacaaa
attggtgttaaaatattaccaccatcaattaataaatctaatcatatctttaaccctgag
aataataatctaagattcccattgttagggattaaaaacttaggtagaaacacagttaga
gatttggtagaagtcagaaaagatggggcttttgaaaattactttgatttcgtaagaagg
tgccataaaacactgaataagagagttatagaatcattaatctatgctggtgctttagat
gaatttggttattctaaacatacaatgattgatcaattggatgaagttatcaattttagt
ttatatggtgattttatcaaacaagatgagtttgttatcgaaaacttagaggaatactct
tatgaggttttaaaagaaaaagaaaaaagtattttaggtttcaatttatttgttaatcca
ttaactaattttgaagaatatattaagaaacataaattactagtaccttcggatataaat
gaagagtatataaatagagaaataagaatggttgctgttttatctaaagtgagacagata
aaaactaagaataataaggaaatggcttttattacagtggatgatgaagcaaaaaaactt
aatggtgtgttgtttactagtacctatcaaaagtttaaagataagcttattaaaggcgaa
gtctatcttctcaaagggaagatagataatagaaataatgaaatacaattaattgttaac
aatttgttaaaacttgataaatga
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