Candidatus Izimoplasma sp. HR1: KQ51_01128
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Entry
KQ51_01128 CDS
T03291
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
mbj
Candidatus Izimoplasma sp. HR1
Pathway
mbj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KQ51_01128 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbj03400
]
KQ51_01128 (recO)
DNA repair and recombination proteins [BR:
mbj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KQ51_01128 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KQ51_01128 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DnaA_N-like_STI
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
AIO19005
LinkDB
All DBs
Position
1162751..1163473
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AA seq
240 aa
AA seq
DB search
MNIDKAFVLNSLDYKDNSKILYLYTVNGHLSVLAHGVKKLNSINRFLSQNGNLISLSISK
GKFPSLKEGHLVNDYESIKKDIYKYTYMNHIMELVRSVISDDLNHEKMFSFLEKLFIKMD
EGTDPDILSFIFELKLLYFVGYGLNFKKCNVCNDNENLVFNPSSGGLTCSKHLNFKDPSY
DRDIYLILQDLYMIDISVTDIPKLDTPLKAVIRNIIDMLYNEFISFKTKSREIIKQIEKY
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcgataaagcgtttgtgttaaattcattggactataaagataacagtaaaata
ctttatctatataccgttaatggtcatttaagtgtgcttgcacatggtgttaaaaaactt
aatagtatcaatcgttttttaagccaaaatggtaatttaattagcttatcgatttcaaaa
ggaaagtttccttcattaaaagaaggacatttagttaatgactatgaaagtatcaaaaag
gatatttacaaatatacttatatgaaccatattatggaattagtacgaagtgttattagt
gatgacttaaatcatgaaaagatgtttagtttcttagaaaaactgtttattaaaatggat
gaaggaacagacccagatatattaagttttatttttgaattaaagctattatattttgtc
ggttacggactaaattttaaaaagtgtaatgtgtgtaatgataatgagaatttagttttc
aatccaagtagcgggggtctaacctgcagtaaacatttaaactttaaagatccttcttat
gatagagatatttatctaattttacaggatttatacatgattgatatcagtgtaactgat
atccctaaactagatactccactaaaagcagttatccgtaatatcattgatatgttgtat
aatgaatttataagttttaaaacaaaatcacgagagattattaaacaaattgaaaaatac
taa
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