Candidatus Izimoplasma sp. HR1: KQ51_01736
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Entry
KQ51_01736 CDS
T03291
Symbol
polC_3
Name
(GenBank) DNA polymerase III PolC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
mbj
Candidatus Izimoplasma sp. HR1
Pathway
mbj03030
DNA replication
mbj03430
Mismatch repair
mbj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KQ51_01736 (polC_3)
03430 Mismatch repair
KQ51_01736 (polC_3)
03440 Homologous recombination
KQ51_01736 (polC_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbj03032
]
KQ51_01736 (polC_3)
03400 DNA repair and recombination proteins [BR:
mbj03400
]
KQ51_01736 (polC_3)
Enzymes [BR:
mbj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KQ51_01736 (polC_3)
DNA replication proteins [BR:
mbj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KQ51_01736 (polC_3)
DNA repair and recombination proteins [BR:
mbj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KQ51_01736 (polC_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
RNase_H_2
DNA_pol3_a_NI
HHH_3
DEDDh_C
T2SSK
Motif
Other DBs
NCBI-ProteinID:
AIO19610
LinkDB
All DBs
Position
complement(1761513..1765964)
Genome browser
AA seq
1483 aa
AA seq
DB search
MNDNFLNLLKQLNLQEKTDIYNGDLVEILIDPTTDSWLFDVEFDEPISISDFEAFHLQIQ
ELPKEIKSCKKAELTIRYKNNDFKRLEDYYDFVLKRLAVNKPRFSAIVDFDIEINKNRIE
VICPSDGTFVTAMLYEIKSELLKMGFDALLATRICKKQPKIKDRIIKEGVDFENTVNQQQ
EFEVVEKRYVSFNNNAVRGIKHTIADVPKTENDLIEYKSMSENTIFTLEGEITKVDYRAL
NTGTHLYTFILSNDVDSIYLKKFVKDKDEKKFMDGTKVGMLAKIKGNASFDKFSDEVTVT
AIVFERTNYIIPKDPRKDLATEKRVELHLHTKMSTLDGIDNITDFVNTAKKWGHEAIALT
DHGNVQSFPELYKATKDKSIKPIYGCEFTFVDERDLQIVQNPIDIAFTDATYVVFDIETT
GLSVNYDKIIEISAIKVKNNQVIDQYDTFVNPERPISLLTTRLTSIKNSDVALAPKIEEV
IPEFKKFFEGSIMVAHNAHFDMGFIYSVLKQNDLYDKEITTIDTLQIARSLYSNQLKRFN
LKAVSKFFKVNLEQHHRAEYDTRATQEIFLHMLRDARHQGITNIKDFNMLSDKSDAYKHS
ISKHINILVKNQQGLRNLYKIVSDANTTHFHREARLLRSVLDENREGLLVGSGCMNSKLF
EIAKNKSYEELKEYAKYYDYLEVQPIRDFAHLEQDMDNFKVNIQDTITRIIKVGKELNIP
VIATGDVHHIREMDKKYREIYVVTPLVGGGLHPLSRYKNIPSQYFRTTNEMLEEFFFVDE
ETRTEIVITNSQLINSKIEFVKAFIPELYAPKDDFLALEGIPSVQNKLIKMVNDKARGLY
GDTLPKIVEDRINKEVKSITENKFSTVYYISHLLVKKSLDEGYLVGSRGSVGSSLVATLM
DITEVNPLPPHYVCPKCKFSSFKMTTEEKGKYSFEENEIRLQAILDKYQTGYDLPNETCP
VCSEDLKKDGHSIPFETFLGFKGDKVPDIDLNFSGDYQPAVHEYIRKIFGHERAFRAGTI
STVAEKTAFGYVKGFLEKKDLTMRKAEIERNASHITGTKRSTGQHPGGIVVVPSYKEIID
VTPIQFPADDTTGNWRTTHFDYHSFEDNLFKLDVLGHDDPTMIRFLMDYVKEHPIDFPFS
DATEIPLDDPKVYSLLSTTQSIGLSPDELGLDSEVASFGVPEMGTRFVRDMLKDSRPNTF
ADIVKISGLSHGTDVWLNNAKDLVTNRTSFGKIAFKDVIGCRDDIMVSLIAWGMEEATAF
EISEFIRKGKAAGNPDKWEGYKLIMRDHKIPNWYIWSCGKIKYMFPKAHATAYVIMALRI
AWFKYYHPIVFYSAYFSKRASDFDVYALKGGEYEIYKKYREIMDKGNAASETEKRTAVVL
EVAYEMVKRGFKFKNINLHKSEARDFVIDEDNKSLIIPFITIDGLGLKVAESVVTARTER
EFKSKDDIKERTSLSKTLFNKLDMLDVFEGMPDNSQMNLFNLS
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atgaatgataattttttaaacttactaaaacaattaaatctccaagagaaaacagatata
tataatggtgatttagtcgaaatcctaatcgatccaactactgatagttggctttttgat
gtggaatttgatgaaccgatttcaataagtgattttgaagcttttcatctacaaatacaa
gaattaccaaaagaaataaaatcttgtaagaaagctgaattaactattaggtataagaac
aacgacttcaaaaggcttgaagattattatgattttgttctaaagcgtttggcagtaaat
aagccaagatttagtgcgatagtagattttgatattgaaataaataaaaaccgtattgaa
gtaatatgtcctagtgatgggacatttgttactgcaatgttatacgagataaaatcagaa
ctattaaaaatggggtttgatgctttattagcaacaagaatatgtaaaaagcaacctaaa
ataaaagaccgaattattaaagaaggtgttgattttgaaaacactgtaaatcaacaacaa
gaattcgaagttgttgaaaagagatatgttagttttaataacaatgcagtgcgaggaatt
aaacatacaattgccgatgtacctaaaacagaaaatgatttaatcgaatataaatctatg
agtgagaatacaatctttacccttgaaggtgaaattaccaaagtagattaccgcgcttta
aatacgggtactcatctctatacttttatccttagtaatgatgtagattctatatatctt
aaaaagtttgtaaaagacaaagatgagaagaaatttatggatggtacaaaagtaggaatg
cttgccaaaattaaaggtaatgcatcatttgataaattctctgatgaagtaactgtaact
gcaattgtctttgaaagaacaaactacataataccaaaagatcctcgaaaagatttggca
acagaaaaacgtgttgagttacatcttcatacaaaaatgtcaactcttgatggaattgac
aatattactgactttgtaaataccgctaaaaaatggggacacgaggctatagctttaact
gatcatggtaatgttcagtcattcccggaattatataaagcaacaaaggataaatcaata
aaaccaatttatggttgtgagtttacctttgttgatgaaagagatttgcaaatcgttcaa
aacccaattgatatagcatttacagatgctacatatgttgtatttgatattgagacaaca
ggtcttagtgttaattatgataaaatcattgaaatcagtgcaatcaaagttaaaaataac
caggttatcgatcaatacgatacctttgtgaacccagaaagaccaattagtctattaaca
acaagactaacatcaattaaaaactctgatgtagctcttgcaccgaaaatagaagaagta
atccctgagtttaagaaattctttgaaggttcaattatggtagcccataatgctcacttt
gatatgggattcatctatagtgttttaaagcaaaacgacttatatgataaagaaatcaca
acaatagatactttacaaatagctagaagtctttatagtaatcaacttaaaagatttaac
ttaaaagctgtttctaagttctttaaagtaaatttggagcaacaccatcgagctgaatac
gatacaagagcaactcaagaaatattcttacatatgctaagagatgctcgtcatcaaggt
atcacaaatattaaagattttaatatgttaagtgataaaagtgatgcatataaacactct
atttctaagcatataaacattttagttaaaaaccaacaaggacttcgtaacttatataaa
atcgtcagtgacgctaatacaacacactttcatagggaagcacgtcttttaagaagtgtt
cttgatgaaaatagagaaggattacttgtaggtagtgggtgtatgaactctaaattattc
gaaatagctaaaaacaaaagctatgaagaattaaaagaatacgctaaatattacgactac
ttggaagtccaaccaatcagagattttgcacacttagaacaagacatggataacttcaaa
gtaaacatccaagatacaataactagaatcataaaagtaggtaaagaacttaacatcccc
gtaatagctactggtgatgttcaccatattagagaaatggataaaaaatatcgtgagata
tatgttgttacaccacttgttggtggtggattacatccattatcaagatataaaaatatc
ccttcacaatactttagaactactaacgaaatgttagaagaattcttctttgttgatgaa
gaaacaagaacggaaatcgttataacaaatagccaattaattaacagtaaaattgaattt
gttaaagcctttattcctgaattatatgctcctaaagatgacttcttagctttagaaggt
atcccgtcagtgcaaaacaaattaatcaaaatggttaatgacaaagcacgaggattatat
ggagataccctacctaaaattgttgaagatcgtattaataaagaagtaaaaagtatcaca
gaaaacaaattctcaactgtttactatatttcccatctcctcgttaaaaaatctctagat
gaaggatatttagtaggttcacgtggttcagttggtagtagtttagtagctactttaatg
gatattacagaagtaaatccattaccacctcattatgtttgtcctaaatgtaaattttct
agttttaaaatgacaaccgaagagaaaggtaaatatagctttgaagagaatgaaattcgt
ctacaagcaatcctcgataaataccaaacagggtacgatttaccaaatgaaacttgcccg
gtttgctcggaagatttaaaaaaggacggacactcaattcctttcgaaacattcttaggt
ttcaaaggagataaagttcccgatatcgaccttaacttttcaggtgattatcaacctgca
gtacatgaatatattagaaaaatatttggccatgaacgtgcctttagagctggaacgatt
tcaactgtagctgagaaaactgcatttgggtatgttaaaggattcctagagaaaaaagac
ctaacaatgcgtaaagcagaaatcgaaagaaatgcttctcatattactggaacaaagcgt
tcaacaggacaacatcctggtggaatcgtagttgtaccttcatacaaagaaataattgat
gttactcccatccaattccctgctgatgatacaacaggtaactggcgtacaacacacttt
gattaccatagttttgaagataacttatttaaattagatgtactaggtcatgatgatcca
acaatgatccgtttcctaatggattatgttaaagaacatccaatcgattttccattctca
gatgcaacagaaatacctttagacgatcctaaagtatatagtttactaagtactacccaa
tcaattggtttatcaccagatgaactaggattagatagtgaagttgctagtttcggtgtc
ccagaaatgggaacgaggtttgttcgtgatatgttaaaagattcgcgtccaaatactttt
gcagatattgtaaaaatatcaggactttcacatggtacagatgtttggttaaataatgcc
aaagacttagtaacaaaccgaactagtttcggtaaaatagccttcaaagacgttattggt
tgtcgtgatgatatcatggtttccttgattgcttggggtatggaagaagcgacagctttt
gaaatatcagagtttatccgtaaaggtaaagctgcaggtaatccagataagtgggaaggc
tataaattaatcatgagggatcataaaattcctaattggtatatttggtcttgtggtaaa
atcaaatacatgttcccgaaagcccatgctacagcatatgttattatggctttaagaatt
gcctggtttaaatactatcatccaatcgtattctatagcgcatatttcagtaagcgagct
agtgattttgatgtttatgcattaaaaggcggagaatatgaaatctataaaaaataccgt
gaaatcatggataaaggaaacgctgcttctgaaacagaaaaaagaacagcagtcgtccta
gaagttgcttatgaaatggtgaagcgaggatttaaatttaaaaatatcaatttacacaaa
tcagaagctagagactttgtaattgatgaagataataaatcacttatcatcccatttatt
acgatagatggacttgggttaaaagtagctgaatcagttgtgacagcccgaactgaaaga
gagtttaaatcaaaagacgatattaaagaaagaacttctttatcgaagacgttattcaat
aaactagatatgttagacgtctttgaaggtatgcctgataatagtcaaatgaatcttttt
aacctttcataa
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