Moraxella bovoculi: AAX09_00970
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Entry
AAX09_00970 CDS
T04324
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mbl
Moraxella bovoculi
Pathway
mbl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAX09_00970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbl03019
]
AAX09_00970
03009 Ribosome biogenesis [BR:
mbl03009
]
AAX09_00970
Enzymes [BR:
mbl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
AAX09_00970
Messenger RNA biogenesis [BR:
mbl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AAX09_00970
Ribosome biogenesis [BR:
mbl03009
]
Prokaryotic type
rRNA processing factors
AAX09_00970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AKG18220
LinkDB
All DBs
Position
complement(206316..209882)
Genome browser
AA seq
1188 aa
AA seq
DB search
MKRILINATHNEEIRVALCKDNHLYDFDLENRTREQKKANIYKGHITRVEPSLEAAFVEY
GSARQGFLPLREIAPEYLHGNLREDNIKQLLKEGDEVIVQVEKEERGNKGAALSTYISLA
GRYLVLMPNNSKAGGISRQISGKVREEMKQIIASLSIPKGMSVIVRTAGLGKGFEDLQND
LNHLLDIWTSILDQNKKRPSPCLVHQEAGVVTRAVRDYLRDDISEVWIDSENAYNEAANF
IAAVMPAQLDKLRKYTEYEPMFARFGIERQIETAYQREVRLPSGGSIVIDQTEALVSIDI
NSSKSTKGSDVSETAYHTNLEAADEIARQLRLRDMGGLIVIDFIDMADARHQKDVEKRLI
EATRHDRARVQFAEISKFGLMEMSRQRLRPSLEEATGYICPRCHGNGMIRDLRSLALSIM
RQIEQIALKERMGEIQAEVPTEIAAFLLNEKRESLVYLEQDSGTRITVLPHAHLESPNFS
LHFNPDGFAPSSYERIVNAEEEEMGDRGYDVNWQTQNEHAEQDSNSRWQKASSSDKQDKP
VAKPAAKQATPEAKPEPQVAAWLSNLFAPKPQAQLAGNLNNNNAAAAIESIVNAGGISLG
ASGIANLVIPSEDKKDVNKEHRPARERSEREPREEVQERRQRNRKSAKKDATVTEEIKND
KTDKKAKKEEPIYPKRESGSRREPRGEVVRGETLTPSNTADKADKKDERPAKKADKQRTR
PSNPNEVVVSVAPIAKETKQSETIHLSLDGSKPLSTKQPNNQLAKIEEAPIADTSVETNI
AADVIEPAATDNSIKITEQTKEQIAETQVAAEQNDVRDNDTPIIDNTRLTELARQMNKAV
NDPRVVIAANSAPSAIFGTAGDFIANVLGDSKGDNFVQNFIQAVAKYRAPVAEFSFANYG
YAPLNDSYLAEFDKQTSVASRISSPQGKSEAPAPRIARRAANDPRGQHPDFKDEADEEAS
ATDGQASSQDEALDLVDISIAQEQKAAIAQPADVDQQTDTSTDVDTSVEAQDIAPSDTAP
DNTDNSDEIAEQDKASSKADPAETVKVEPVDDSVKTEDAETSKSADSETLLEQVKENVEV
AVQTISDKVAELLETEDESSSEDEVEAPSKNEPTKKSKTSANSYKDMIENVAGQLLPQVG
ILNLAQPKPAKTRIRKTATKGDNKPKSEVRKAGSKVAAAKSDSDQKTE
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcatcctaatcaacgccacgcacaacgaagagattcgtgtggcgctatgtaaa
gacaatcacctttacgattttgacttagaaaatcgcacccgcgaacaaaagaaagccaac
atctacaaaggtcacatcactcgagttgagccatcactagaagcggcttttgtcgaatat
ggctcagcgcgtcaaggctttttgccactgcgtgaaatcgcacctgaatatctacacggc
aatctacgcgaagacaacatcaaacaacttctaaaagaaggtgatgaggtcatcgtccaa
gtcgaaaaagaggaacgcggcaacaaaggcgcggcactatcaacttacatctcgctggct
ggtcgttatttggtattaatgccaaataacagcaaggcaggtggcatcagccgccaaatc
tcaggcaaagtccgcgaagagatgaaacagatcatcgcaagcctgtccatcccaaaaggc
atgagcgtcatcgtgcgcactgcaggacttggtaagggttttgaagacctacaaaacgat
ctgaatcacctattagacatctggacatccatcctagaccaaaacaaaaaacgcccaagt
ccttgcttggttcaccaagaggcaggggtcgtcactcgtgccgtgcgtgattacttgcgt
gatgacatcagcgaagtgtggatcgacagcgagaacgcttataatgaagccgccaatttc
atagccgccgtgatgccagcccaacttgacaagctgcgcaaatacaccgaatacgagccg
atgtttgcacgttttggcatcgaacgccagatcgaaaccgcctatcagcgcgaagttcgc
ctgccatctggcggatcgattgtcatcgatcagaccgaagccttggtgtccatcgacatc
aactcatcaaaatccaccaaaggctctgacgtctctgagactgcctatcacactaactta
gaagcagcggacgaaatcgcacgccagcttcgactaagagacatgggcggactgattgtc
atcgacttcatcgacatggctgatgcccgtcatcaaaaagacgtcgaaaaacgcctgatc
gaagccacgcgccacgaccgtgctcgtgtacagttcgctgagatcagtaaatttggtctg
atggagatgagccgtcagcgcctacgcccaagcctagaagaagccaccggctacatctgc
ccacgctgtcatggcaatggcatgattcgcgatttgcgctctttggcattatcaatcatg
cgtcagatcgaacagatcgccctaaaagagcgcatgggcgagatccaagcagaagttcca
actgagatcgccgctttcttattgaacgaaaagcgcgaaagcttggtatacctagaacaa
gactctggcacacgcatcactgtcttgccacatgcacacctagaaagccctaactttagc
ctacacttcaacccggacggctttgcaccgtcaagctatgagcgcatcgtaaatgccgaa
gaagaagaaatgggcgatcgcggttatgatgtcaactggcaaacccaaaatgagcacgca
gagcaggacagcaacagccgctggcaaaaagcaagctcaagcgataagcaggataaacct
gtcgccaagcctgcagccaaacaagccactcctgaagcgaagcctgaaccacaagtcgct
gcttggctatccaacctgttcgcgccaaaaccacaagcgcaattggcaggcaacctaaac
aacaataacgctgccgctgccatcgaatcaatcgtcaatgcaggcggcattagccttggc
gcgagcggcattgccaacctagtcatccctagcgaagacaaaaaagatgtgaataaagag
catcgtccagcacgcgaaagaagcgaacgcgaaccacgcgaagaagttcaagaacgtcgc
caaagaaatagaaagtctgctaagaaagacgcaaccgtcaccgaagaaatcaaaaacgac
aaaacggataaaaaggctaaaaaggaagaacctatttatccaaaacgtgaaagcggttca
cgtcgcgagcctcgcggtgaagtggtacgcggtgagacactaaccccaagcaacaccgcc
gataaagcggacaaaaaagacgagcgccccgccaaaaaagcagacaaacagcgcactcgt
ccaagcaatccaaatgaagtggtggtgagtgtcgcaccgatcgccaaagaaaccaaacaa
agcgagaccattcatttgtcacttgatggcagtaaacctctttcgaccaagcagccgaat
aaccagcttgccaagatcgaagaagcgccaatagctgacacatcagtagagacgaatatc
gccgccgatgttattgaacctgccgctaccgataatagcatcaaaataacggaacaaacc
aaagagcaaatcgccgaaactcaagtggcagccgagcaaaacgacgttagggataatgat
acgcctatcattgacaatacacgcctaaccgagcttgcacgtcaaatgaataaggctgtc
aacgatccacgcgtggtcatcgctgccaacagcgcaccaagcgccatctttggcacggca
ggtgattttattgccaatgtcctaggcgatagtaaaggtgataacttcgtacaaaacttc
atccaagccgttgccaaatatcgcgcgcctgtggctgagtttagctttgccaattatggc
tatgcgccgctgaacgactcttatcttgctgaatttgataagcagaccagcgtcgcatca
cgcatcagctcaccacaaggcaaatcagaagcaccagcgccacgaatcgcacgtcgcgca
gccaacgatccacgcggtcagcaccctgacttcaaagacgaagcagatgaggaggcgtct
gcaaccgatggccaagcatcatctcaggatgaggctttggatttggttgatatctccatc
gctcaagagcaaaaagcagcaatcgcacaaccagctgatgtcgatcaacagactgataca
tctactgatgtcgatacaagtgtcgaggcacaggacatcgcaccaagcgatacagcgcct
gataatactgacaacagtgatgagatcgccgagcaggacaaggcatcatcaaaggcagat
cctgctgagactgtcaaagtcgagccagtcgatgactcagtgaaaacagaagatgcagaa
acttcaaagtcagcagattctgaaactctgcttgagcaagtcaaggagaatgtggaagtt
gccgtgcagaccataagtgataaggttgcagaactgctagagaccgaagatgaatcatca
tcagaagatgaagtagaagcacctagcaagaatgaacctaccaagaagtcaaaaaccagt
gcaaacagctacaaagacatgatcgaaaacgtcgcaggtcagctattgccacaggtaggc
attctaaaccttgcacagccgaagcctgcaaaaacacgcatcagaaagaccgccaccaaa
ggcgataacaaaccaaaatctgaagtgcgtaaagcaggctcaaaggtcgcagccgccaag
tctgatagtgaccaaaaaactgagtaa
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