Mycobacterium tuberculosis variant bovis BCG Mexico: BCGMEX_0240c
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Entry
BCGMEX_0240c CDS
T01727
Symbol
gabD1
Name
(GenBank) Succinate-semialdehyde dehydrogenase [NADP+] 1
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
mbm
Mycobacterium tuberculosis variant bovis BCG Mexico
Pathway
mbm00250
Alanine, aspartate and glutamate metabolism
mbm00310
Lysine degradation
mbm00350
Tyrosine metabolism
mbm00650
Butanoate metabolism
mbm00760
Nicotinate and nicotinamide metabolism
mbm01100
Metabolic pathways
mbm01120
Microbial metabolism in diverse environments
Module
mbm_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
mbm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
BCGMEX_0240c (gabD1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BCGMEX_0240c (gabD1)
00310 Lysine degradation
BCGMEX_0240c (gabD1)
00350 Tyrosine metabolism
BCGMEX_0240c (gabD1)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
BCGMEX_0240c (gabD1)
Enzymes [BR:
mbm01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
BCGMEX_0240c (gabD1)
1.2.1.20 glutarate-semialdehyde dehydrogenase
BCGMEX_0240c (gabD1)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
BCGMEX_0240c (gabD1)
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GFIT
Motif
Pfam:
Aldedh
Acetyltransf_6
LuxC
fvmX5
Motif
Other DBs
NCBI-ProteinID:
AET17529
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Position
complement(277969..279504)
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AA seq
511 aa
AA seq
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MRSVTCSATLVLPVIEPTPADRRPRHLLLGSAGHVSGRLDTGRFVQTHPAKDVSVPIATI
NPATGETVKTFTAATDDEVDAAIARAHRRFADYRQTSFAQRARWANATADLLEAEADQAA
AMMTLEMGKTLAAAKAEALKCAKGFRYYAENAEALLADEPADAAKVGASAAYGRYQPLGV
ILAVMPWNFPLWQAVRFAAPALMAGNVGLLKHASNVPQCALYLADVIARGGFPDGCFQTL
LVSSGAVEAILRDPRVAAATLTGSEPAGQSVGAIAGNEIKPTVLELGGSDPFIVMPSADL
DAAVSTAVTGRVQNNGQSCIAAKRFIVHADIYDDFVDKFVARMAALRVGDPTDPDTDVGP
LATEQGRNEVAKQVEDAAAAGAVIRCGGKRLDRPGWFYPPTVITDISKDMALYTEEVFGP
VASVFRAANIDEAVEIANATTFGLGSNAWTRDETEQRRFIDDIVAGQVFINGMTVSYPEL
PFGGVKRSGYGRELSAHGIREFCNIKTVWIA
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcggtgacatgttccgccacgctggtcctgcccgtgatagagcccaccccagcc
gataggaggccccgacacctcctgctcgggagcgctggccacgttagtggcaggctggac
accggacgatttgtgcaaacccacccagcaaaggatgtcagcgtgcccatcgccaccatc
aacccggctaccggcgaaacagtcaagacattcactgcggcgaccgatgacgaagtcgac
gcggcaatagcccgggcccaccggcggttcgccgactaccgccagaccagcttcgcccag
cgcgcccggtgggccaatgccaccgccgacttgctggaagccgaggccgaccaggccgcc
gcgatgatgacgctcgagatgggcaagacgctggccgcggccaaagccgaggcactgaag
tgcgccaagggttttcgctactacgccgaaaacgccgaggcgttgctggccgacgaaccc
gccgatgcggccaaggtcggggcgtcggcggcctacggccgataccagccgctcggggtg
atcctggcggtgatgccatggaacttccccctgtggcaagcggttcggttcgccgcaccg
gcactgatggccggaaacgtcggcctgctcaagcacgcgtcgaacgtgccgcaatgcgcg
ctgtacctggccgacgtcatcgcccgaggcggcttcccggacggctgcttccagacgttg
cttgttagctcgggagccgtcgaagccatcctgcgtgatccccgggtcgcggcggccacg
ctgaccggaagcgagccggccggccaatcggtgggcgctatcgccggtaacgagatcaag
ccgaccgtgctcgagctcggcggcagcgacccgttcatcgttatgccgtcggccgatctg
gacgccgcggtcagcaccgccgtcaccggccgggtgcagaacaacggccaatcctgcatc
gccgccaagcggttcatcgtccacgccgacatttacgacgatttcgtcgacaagttcgtc
gcgcggatggcggcgttacgggtcggcgacccgaccgacccggacaccgacgtgggcccg
ctggccaccgagcagggccgcaacgaggttgccaagcaagtcgaggatgctgccgcggcg
ggcgcggtgatccggtgcggcggaaagcgtctcgaccggccgggctggttctacccgccg
accgtgatcaccgacatctccaaggacatggctctctacaccgaggaggtcttcggtccg
gtcgcctcggtgttccgcgcggcgaacatcgacgaggccgtcgagatcgccaacgccacc
accttcgggctgggatccaacgcctggacccgcgacgagaccgagcaacgacgcttcatc
gacgacatcgtggcgggccaggtttttatcaacggcatgacggtgtcctatcccgaattg
ccgttcggcggggtcaagcgctcgggctatggccgggaactgtccgcacacgggatacgc
gagttctgcaacatcaagaccgtctggatcgcctag
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