Mycobacterium tuberculosis variant bovis BCG Mexico: BCGMEX_2101c
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Entry
BCGMEX_2101c CDS
T01727
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
mbm
Mycobacterium tuberculosis variant bovis BCG Mexico
Brite
KEGG Orthology (KO) [BR:
mbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mbm03051
]
BCGMEX_2101c (pafA)
Enzymes [BR:
mbm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
BCGMEX_2101c (pafA)
Proteasome [BR:
mbm03051
]
Prokaryotic proteasome
Bacterial regulatory particles
BCGMEX_2101c (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
AET19378
LinkDB
All DBs
Position
complement(2316139..2317497)
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AA seq
452 aa
AA seq
DB search
MQRRIMGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATAECDSLVQLVTHDRAGEWVLEDLLVDAEQRLADEGIGGDIYLFKNNTDSAGNSY
GCHENYLIVRAGEFSRISDVLLPFLVTRQLICGAGKVLQTPKAATYCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAEKYRRLHVIVGDSNMSETTTMLKVGTAALVLEMIESGVAF
RDFSLDNPIRAIREVSHDVTGRRPVRLAGGRQASALDIQREYYTRAVEHLQTREPNAQIE
QVVDLWGRQLDAVESQDFAKVDTEIDWVIKRKLFQRYQDRYDMELSHPKIAQLDLAYHDI
KRGRGIFDLLQRKGLAARVTTDEEIAEAVDQPPQTTRARLRGEFISAAQEAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRAVDERVKRLIASM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcgtcgaatcatgggcatcgaaaccgagttcggtgtcacctgcacatttcacggt
caccgtcggctgtccccggacgaggtggcccgctacctgtttcgccgtgtggtgtcctgg
ggccgcagctccaacgtcttcctgcgtaacggtgcgcgcctgtatctcgacgtgggcagt
catcccgagtacgccaccgccgaatgcgacagcctggtgcagctggtcacccatgaccgg
gccggtgaatgggtgctggaagacctgctcgttgacgccgagcagcggctggccgacgag
ggcatcggcggcgacatctacctgttcaagaacaacaccgattcggcgggcaactcctac
ggctgccacgaaaactacctgatcgtgcgggccggtgagttctcccggatctccgacgtg
ctgctgcccttcctggtcacccgccagctgatctgcggggccggcaaggtgctgcagacc
cccaaggccgccacctactgcttaagccaacgcgccgaacacatttgggagggcgtctct
agcgccacgacccgatcccgccccattatcaacacccgcgacgagccacatgccgacgcc
gagaagtaccggcggctgcacgtcatcgtcggcgactccaacatgtccgagaccaccacc
atgctcaaggtgggcaccgcggcgctcgtgctggaaatgatcgaaagtggagtcgccttc
cgtgatttttccctggataacccgatccgcgccatccgtgaggttagccatgatgtcacc
ggtcgccggccggtgcggttggccggaggccgtcaggccagcgcgctggacatccagcgg
gagtactacacccgcgcagtcgagcacttgcagactcgggagcccaacgcgcagatcgag
caggtcgtcgacctgtggggccgccaactcgatgccgtcgaaagccaggatttcgccaag
gtcgacaccgaaatcgactgggtgatcaaacgcaagctgtttcagcgttatcaggaccgc
tatgacatggagttgtcccacccgaagatcgctcagctggatctggcctaccacgacatc
aagcgcggacgcgggatctttgatctcctgcagcgcaaagggttggccgcgcgcgtcacc
accgacgaagaaatcgcggaggccgtcgatcagcccccacagaccacccgggcccggctg
cgcggtgagttcatcagcgccgcgcaggaggcgggacgtgatttcaccgtcgactgggta
catctcaaactcaacgaccaggcgcagcgcaccgtgctgtgcaaagacccgttccgggcg
gtcgatgagcgggttaagcggctgatcgcgagcatgtag
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