Mycobacterium tuberculosis variant bovis BCG Mexico: BCGMEX_3003c
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Entry
BCGMEX_3003c CDS
T01727
Symbol
hupB
Name
(GenBank) Putative DNA-binding protein HU-like protein
KO
K03530
DNA-binding protein HU-beta
Organism
mbm
Mycobacterium tuberculosis variant bovis BCG Mexico
Brite
KEGG Orthology (KO) [BR:
mbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbm03032
]
BCGMEX_3003c (hupB)
03036 Chromosome and associated proteins [BR:
mbm03036
]
BCGMEX_3003c (hupB)
03400 DNA repair and recombination proteins [BR:
mbm03400
]
BCGMEX_3003c (hupB)
DNA replication proteins [BR:
mbm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BCGMEX_3003c (hupB)
Chromosome and associated proteins [BR:
mbm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BCGMEX_3003c (hupB)
DNA repair and recombination proteins [BR:
mbm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BCGMEX_3003c (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AET20274
LinkDB
All DBs
Position
complement(3277055..3277672)
Genome browser
AA seq
205 aa
AA seq
DB search
MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVGASAAKKVAKKAPA
KKATKAAKKAATKAPAKKAATKAPAKKAVKATKSPAKKVTKAVKKTAVKASVRKAATKAP
AKKAAAKRPATKAPAKKATARRGRK
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcagagctcattgacgtgctcacacagaaattgggctcggaccgtcggcag
gcgaccgccgccgtcgagaatgtcgttgacacgattgtgcgtgcggtacacaaaggcgac
agcgtcaccattaccgggttcggtgtgttcgaacagcgtcgccgcgcggctcgagtggcc
cgcaatccgcgtaccggcgagacagtaaaggtgaagccgacgtcggtgccggcgttccgc
ccgggcgcgcaattcaaagcggttgtgtctggcgcgcagcgtctcccggcagaaggaccc
gctgttaagcgtggtgtgggggccagtgcagccaagaaggtagcgaagaaggcacctgcc
aagaaggcgacaaaggccgccaagaaggcggcgaccaaggcgcccgccaagaaagcggcg
accaaggcgcccgccaagaaagctgtcaaggccacgaagtcacccgccaagaaggtgacc
aaggcggtgaagaagaccgcggtcaaggcatcggtgcgtaaggcggcgaccaaggcgccg
gcaaagaaggcagcggccaagcggccggctaccaaggctcccgccaagaaggcaaccgct
cggcggggtcgcaaatag
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