Mycobacterium tuberculosis variant bovis BCG Mexico: BCGMEX_3219c
Help
Entry
BCGMEX_3219c CDS
T01727
Symbol
uvrD2
Name
(GenBank) Putative DNA helicase II-like protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mbm
Mycobacterium tuberculosis variant bovis BCG Mexico
Pathway
mbm03420
Nucleotide excision repair
mbm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BCGMEX_3219c (uvrD2)
03430 Mismatch repair
BCGMEX_3219c (uvrD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbm03400
]
BCGMEX_3219c (uvrD2)
Enzymes [BR:
mbm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BCGMEX_3219c (uvrD2)
DNA repair and recombination proteins [BR:
mbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BCGMEX_3219c (uvrD2)
MMR (mismatch excision repair)
Other MMR factors
BCGMEX_3219c (uvrD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AET20490
LinkDB
All DBs
Position
complement(3500956..3503058)
Genome browser
AA seq
700 aa
AA seq
DB search
MSIASDPLIAGLDDQQREAVLAPRGPVCVLAGAGTGKTRTITHRIASLVASGHVAAGQVL
AVTFTQRAAGEMRSRLRALDAAARTGSGVGAVQALTFHAAAYRQLRYFWSRVIADTGWQL
LDSKFAVVARAASRTRLHASTDDVRDLAGEIEWAKASLIGPEEYVTAVAAARRDPPLDAA
QIAAVYSEYEALKARGDGVTLLDFDDLLLHTAAAIENDAAVAEEFQDRYRCFVVDEYQDV
TPLQQRVLSAWLGDRDDLTVVGDANQTIYSFTGASPRFLLDFSRRFPDAAVVRLERDYRS
TPQVVSLANRVIAAARGRVAGSKLRLSGQREPGPVPSFHEHSDEPAEAATVAASIARLIA
SGTPPSEVAILYRVNAQSEVYEEALTQAGIAYQVRGGEGFFNRQEIKQALLALQRVSERD
TDAALSDVVRAVLAPLGLTAQPPVGTRARERWEALTALAELVDDELAQRPALQLPGLLAE
LRRRAEARHPPVVQGVTLASLHAAKGLEWDAVFLVGLADGTLPISHALAHGPNSEPVEEE
RRLLYVGITRARVHLALSWALSRSPGGRQSRKPSRFLNGIAPQTRADPVPGTSRRNRGAA
ARCRICNNELNTSAAVMLRRCETCAADVDEELLLQLKSWRLSTAKEQNVPAYVVFTDNTL
IAIAELLPTDDAALIAIPGIGARKLEQYGSDVLQLVRGRT
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatagccagcgacccattgattgccgggctggacgaccagcagcgcgaagccgta
ctggctccgcgtggaccggtgtgcgtgctggccggtgccggaaccggcaagacccgcacc
atcactcaccggatcgcttcgctggtcgcgagcggtcacgtcgccgccgggcaggtgctg
gctgtgacattcacccagcgcgcggcgggcgaaatgcgcagccggttgcgcgcactcgac
gccgcggcacggaccggttcgggcgtcggcgctgtgcaggcgctgacctttcacgcggcc
gcgtatcgccagctgcggtacttctggtcgcgcgtaatcgctgacaccggctggcagctg
ctggacagcaagttcgccgtggtggcccgcgccgccagccgcaccaggctgcacgccagc
accgatgatgtgcgtgacctggccggcgagatcgagtgggccaaggcgtccctgatcggc
cccgaggagtatgtgaccgcagtggcggccgcacgccgagaccccccgttggacgccgcg
caaatcgcggctgtctactccgaatacgaggcgctcaaggcccgcggcgacggcgtcacc
ttacttgacttcgacgacctgttgctgcacaccgcggccgcgattgaaaacgacgccgcg
gtggccgaggagttccaggaccggtaccggtgtttcgtcgtggacgagtaccaggacgtc
acccccctgcagcagcgggtgctctcggcctggttgggtgatcgggacgacctgaccgtc
gtcggcgacgccaaccagaccatctactcgtttaccggggcttcgcctcgtttcctactc
gacttctcgcggcggttcccggacgccgcggtggtgcggctggagcgtgattaccggtca
actccgcaggtggtgtcattggctaaccgggtgatcgccgccgcccggggccgtgttgcc
ggcagcaagctacggttgtccggccagcgtgagccgggtccggtcccgtcgttccatgag
cattccgacgagcccgccgaggctgccacggtggcggcgtcaatcgcccggttaatcgca
tcgggcactccgccatccgaggtagccattctctaccgagtcaatgcgcagtcagaggtt
tatgaagaggcgttgacccaggcgggtatcgcctatcaggttcgcggtggcgaggggttt
ttcaaccgtcaggaaatcaagcaggcgttgcttgccttacagcgtgtgtccgaacgtgat
accgatgccgcgttgtccgacgtggttcgcgcggtgctcgcaccactggggctgacggca
caaccgccggtcggcacccgcgccagggaacgctgggaagcgctcaccgcgctggccgag
ctggtcgacgacgagctggcgcagcgtcccgcactgcagctgccaggcctgcttgccgag
ctacgccggcgggcggaggcgcggcacccaccggtggtgcagggcgtcacgctggcctca
ctgcacgccgccaagggactggaatgggacgcggtgttcctggtcggattggctgacggc
acgctgcccatctcacatgcgctggcacacggccccaatagcgagcccgtagaggaagag
cgtcggctgctctacgtcggaatcacacgggcccgagtccatttggcgctcagctgggcg
ctatcacggtccccgggcgggcgccagagccgcaagccctcgcggttcctcaacggcatt
gcgccgcagacgcgcgccgatccggtgccgggcacatcccgacgcaaccggggcgccgca
gcgcgctgccggatctgtaacaacgagctgaacacttcggcggccgtcatgctgcggcgg
tgtgagacgtgtgcagccgacgtcgacgaggagttgttgttgcagctcaagtcctggcgt
ctgagcaccgccaaggaacagaacgtccccgcctatgtcgttttcaccgacaacaccctg
atcgcgatcgccgagctgctacctaccgacgacgcggcgctgatcgcgatccccggcatc
ggtgcccgcaagctggaacaatacggatcggacgtgctgcagctggttcgcggtcggacc
tga
DBGET
integrated database retrieval system
