KEGG   Mycobacterium tuberculosis variant bovis BCG Mexico: BCGMEX_3313c
Entry
BCGMEX_3313c      CDS       T01727                                 
Symbol
sigF
Name
(GenBank) RNA polymerase sigma factor SigF
  KO
K03090  RNA polymerase sigma-B factor
Organism
mbm  Mycobacterium tuberculosis variant bovis BCG Mexico
Brite
KEGG Orthology (KO) [BR:mbm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mbm03021]
    BCGMEX_3313c (sigF)
Transcription machinery [BR:mbm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BCGMEX_3313c (sigF)
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_23 HTH_Crp_2 HTH_24 HTH_3 MarR HTH_IclR MarR_2 DUF7343 Sigma70_ECF HTH_31 IF2_N
Other DBs
NCBI-ProteinID: AET20584
LinkDB
Position
complement(3599942..3600727)
AA seq 261 aa
MTARAAGGSASRANEYADVPEMFRELVGLPAGSPEFQRHRDKIVQRCLPLADHIARRFEG
RGEPRDDLIQVARVGLVNAAVRFDVKTGSDFVSFAVPTIMGEVRRHFRDNSWSVKVPRRL
KELHLRLGTATADLSQRLGRAPSASELAAELGMDRAEVIEGLLAGSSYHTLSIDSGGGSD
DDARAITDTLGDVDAGLDQIENREVLRPLLEALPERERTVLVLRFFDSMTQTQIAERVGI
SQMHVSRLLAKSLARLRDQLE
NT seq 786 nt   +upstreamnt  +downstreamnt
gtgacggcgcgcgctgccggcggttctgcatcgcgagctaacgaatacgccgacgttccg
gagatgtttcgcgagctggttggtttgcctgccggctcaccggaattccagcggcaccgg
gacaagatcgttcagcggtgcttgccgctggccgatcacatcgcgcggcggttcgagggt
cgcggcgaaccgcgtgacgaccttattcaggtcgcgcgggtcgggctggtcaacgccgcg
gttcgcttcgacgtgaagaccgggtcggacttcgtctccttcgcggttcctaccatcatg
ggcgaggtccgacgacacttccgcgacaacagctggtcggtcaaggttccccggcgtctc
aaggaactgcatctgcggctaggtaccgccaccgccgatttgtcgcagcggctcgggcgg
gcgccgtcggcatcggagctcgccgcggagctcgggatggaccgcgctgaggttatcgaa
ggtttgctggcgggtagttcctaccacaccttgtccatcgacagcggtggcggcagcgac
gacgatgcccgcgcaatcacagacaccctgggcgacgtggatgcgggtcttgaccagatc
gagaatcgggaggtgcttcgtccgttgctcgaggcgttgcccgagcgggaacgaacggtc
ttggtgctcaggttcttcgactcgatgacccaaacgcagatcgccgagcgcgtcggtatc
tcacagatgcacgtgtcgcggctgctggccaagtcattggcacggctacgggatcagttg
gagtag

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