Mycobacterium tuberculosis variant bovis BCG Mexico: BCGMEX_3959c
Help
Entry
BCGMEX_3959c CDS
T01727
Name
(GenBank) putative alanine and proline rich protein
Organism
mbm
Mycobacterium tuberculosis variant bovis BCG Mexico
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNT
Motif
Other DBs
NCBI-ProteinID:
AET21224
LinkDB
All DBs
Position
complement(4326747..4329287)
Genome browser
AA seq
846 aa
AA seq
DB search
MAPLAVDPAALDSAGGAVVAAGAGLGAVISSLTAALAGCAGMAGDDPAGAVFGRSYDGSA
AALVQAMSVARNGLCNLGDGVRMSAHNYSLAEAMSDVAGRAAPLPAPPPSGCVGVGAPPS
AVGGGGGAPKGWGWVAPYIGMIWPNGDSTKLRAAAVAWRSAGTQFALTEIQSTAGPMGVI
RAQQLPEAGLIESAFADAYASTTAVVGQCHQLAAQLDAYAARIDAVHAAVLDLLARICDP
LTGIKEVWEFLTDQDEDEIQRIAHDIAVVVDQFSGEVDALAAEITAVVSHAEAVITAMAD
HAGKQWDRFLHSNPVGVVIDGTGQQLKGFGEEAFGMAKDSWDLGPLRASIDPFGWYRSWE
EMLTGMAPLAGLGGENAPGVVESWKQFGKSLIHWDEWTTNPNEALGKTVFDAATLALPGG
PLSKLGSKGRDILAGVRGLKERLEPTTPHLEPPATPPRPGPQPPRIEPPESGHPAPAPAA
KPAPVPANGPLPHSPTESKPPPVDRPAEPVAPSSASAGQPRVSAATTPGTHVPHGLPQPG
EHVPAQAPPATTLLGGPPVESAPATAHQPQWATTPAAPAAAPHSTPGGVHSTESGPHGRS
LSAHGSEPTHDGASHGSGHGSGSEPPGLHAPHREQQLAMHSNEPAGEGWHRLSDEAVDPQ
YGEPLSRHWDFTDNPADRSRINPVVAQLMEDPNAPFGRDPQGQPYTQERYQERFNSVGPW
GQQYSNFPPNNGAVPGTRIAYTNLEKFLSDYGPQLDRIGGDQGKYLAIMEHGRPASWEQR
ALHVTSLRDPYHAYTIDWLPEGWFIEVSEVAPGCGQPGGSIQVRIFDHQNEMRKVEELIR
RGVLRQ
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgttggcggtcgatcccgcggcccttgatagcgcgggcggcgcggtggtggct
gcgggtgcgggtttgggtgcggtgatctcgtcgctgaccgcggcgctggccgggtgtgcg
gggatggccggtgatgatccggctggggcggtgttcgggcgctcctatgacggttcggcg
gccgcgctggtgcaggcgatgtcggtggcgcgcaacggattgtgcaacctcggcgatggg
gtgcgcatgagcgcgcacaactactcgttggccgaggcgatgtcggatgtcgctgggcgg
gcggcgccgttgccggcgccgccgccgagcggctgtgtcggcgtgggtgcgccgccgtcg
gcggtcggtggcggcggtggcgccccgaagggctgggggtgggtggccccgtatatcggg
atgatctggccgaacggggattcgacaaagctacgtgcggcggctgtggcgtggcgcagc
gcgggcacgcagttcgcgctgactgagattcagtcgacggcggggccgatgggcgttatt
cgcgcccagcagctcccggaggcggggctgatcgagtcggcgtttgctgacgcgtacgcc
agcaccaccgctgtcgtgggccaatgccaccagctggcggcccagctagacgcctatgcc
gcccgcatcgacgcggtgcatgcggcggtcctggatttgttggcccgcatctgcgatccg
ctgaccgggatcaaagaggtgtgggagtttctgaccgaccaggacgaagacgagatccag
cgcatcgcccatgacatcgcggtggtggtcgaccagttcagcggggaagtggacgcgttg
gctgcggagatcaccgcggtggtgtcgcacgccgaggcggtgatcaccgcgatggcagac
cacgcaggcaaacaatgggatcggttcttgcacagcaacccggtgggtgtggtcatcgat
ggcaccgggcagcagctcaaaggcttcggcgaggaggccttcgggatggccaaggactcc
tgggacctagggccactgcgcgcctcgatagacccgttcgggtggtatcgctcctgggag
gagatgctgactgggatggcgccgctggcgggcctgggcggcgagaacgctcccggcgtt
gtggagtcgtggaagcagttcggcaaaagcctcatccattgggatgagtggacgaccaac
cctaatgaggcgctaggcaagaccgtattcgacgccgcgacgctagctttgccgggcggg
ccgctgtcgaaacttggcagcaagggccgcgacattctcgcgggcgtgcgaggcctcaag
gagcggcttgagccgacgacaccgcaccttgagcccccagcaacgccgccgcggccagga
ccgcaaccaccacggatcgaaccaccagaatcgggccacccggcacccgcgcccgcggcg
aaaccggcgcccgtgcccgccaacggtccactgccgcacagccccaccgaatccaaaccg
ccgcccgtcgacagaccggctgaaccggtggcgccgtcgtcggcgtcggcaggccagccc
cgggtatccgcagccaccacgcccggcacacatgtgccgcatggcctgccgcaaccgggt
gaacatgtcccggcgcaagcaccaccggcgacgacgttgcttggcggacctcctgtcgag
tcagcgcccgctaccgcgcaccaaccccagtgggcgaccacaccagcagcacccgcggcg
gcgccgcattccacgcccggaggcgttcactcaaccgaatcggggcctcacggccgatca
ctgagcgcacacggatccgagccgacccacgacggtgcgtctcacgggtcaggccacggt
agcggtagcgagccacctgggctgcatgcgccgcatcgcgagcagcagcttgcaatgcat
tcgaacgaaccagctggagagggttggcatcggttatccgacgaagcggttgacccgcag
tatggcgagccattatcgcgccactgggactttacagacaatccggccgatcgcagtcgg
ataaacccggttgtggcccagctcatggaggaccccaacgccccattcggccgcgatcct
cagggacagccctatacccaagaacggtatcaagagcgatttaatagtgtaggcccatgg
ggccagcagtactctaattttccgcctaacaatggtgcggttccagggacaaggatcgcc
tacactaatctcgaaaaatttcttagtgactacggcccccagctagatcgtataggcggc
gatcagggcaagtacctggcgatcatggaacatgggcgcccggcatcatgggaacaacgt
gccctgcacgtgacgtcgttacgcgacccctaccacgcgtataccattgattggttgcct
gagggatggttcatcgaagtatctgaggtcgcgccggggtgcggccagccgggcggatcc
atccaagtgcggatattcgatcatcagaacgagatgcgcaaagtggaagagttaataagg
cgcggggtgttgcgacagtga
DBGET
integrated database retrieval system