Methanoregula boonei: Mboo_0655
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Entry
Mboo_0655 CDS
T00578
Name
(GenBank) tRNA intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mbn
Methanoregula boonei
Brite
KEGG Orthology (KO) [BR:
mbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mbn03016
]
Mboo_0655
Enzymes [BR:
mbn01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Mboo_0655
Transfer RNA biogenesis [BR:
mbn03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Mboo_0655
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Motif
Other DBs
NCBI-ProteinID:
ABS55173
UniProt:
A7I612
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All DBs
Position
622171..623229
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AA seq
352 aa
AA seq
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MSPLRPYYTVLPIVPAVKAIFDGTSVLTGKDGRTLYDQSGYGRPEGEGIRLAPQEALYLL
HRQKLDVPGYTFDSLLAEYADQRNFLRSFLVYRDLRERGYVVQTGPHDFRVFRRGEKPGT
GESLYLVRVLSERDPVRFTKLIEEVVTSRNMRKQYVLAVVDDEEELTYYEIKLQKLADAS
VHAPPIAKAESVLVGRSAMIRVPLQSDLERAGFGKRLDDERLMLAPVELLYLMDCGVLKA
KRDGAFISTADYFAYASESDPELAAKEKVYAELRRHDFTPRTGYKFGHHFRVYCGKNVHS
DLLVHAIEKEAVMPISVVSRSVRMAHSVKKKMLFGCVHTTGIQFVEFARIKL
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
gtgtcccccctacgtccttattatactgtactcccaatagttcctgcagtgaaggcgata
tttgacggcacctcggtgctgaccggaaaggacgggcggactctctatgaccagagcggg
tacgggcgccccgagggcgaggggatccgcctcgcgccgcaggaagctctctaccttctt
catcgccagaaactcgatgttcccgggtataccttcgattcgctccttgccgagtatgcg
gatcagcgcaatttcctgcgcagtttccttgtgtaccgcgatctgcgcgaacgcgggtac
gtagtccagaccgggccccatgatttccgcgtattccggcgcggggagaaacccgggacc
ggcgagtcgctctacctggtgcgggtcctctcggaacgggatccggtccggttcaccaaa
ctcatagaagaggtggtcacatcaaggaacatgcgcaagcagtacgtgctcgcggttgta
gacgacgaggaggagctcacctattacgagatcaagctccagaaactcgccgatgcatca
gtccatgcgccccctattgcaaaggcagaatctgttctcgtgggaagatctgccatgatc
cgggtacccctgcaatcggatcttgaacgagccgggtttgggaagcggcttgatgacgaa
cggctcatgcttgccccggtagagctgctctatctcatggattgcggggtcctcaaggca
aaaagggacggggctttcatcagcacggcagattatttcgcatacgcctcggagtcggat
ccggaacttgccgcaaaggaaaaagtgtacgccgagttgcgccggcacgatttcacgccc
cggaccggttacaagttcggccaccacttccgtgtctactgcgggaagaacgtgcattcc
gatctcctggtgcatgccattgaaaaggaagccgtcatgcctatcagcgtggtttcacgg
tcagtgaggatggcgcatagcgtcaaaaagaagatgttgtttggctgtgtacatactacc
ggtatccagttcgtcgaatttgcgcggatcaagttataa
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