Methanoregula boonei: Mboo_1092
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Entry
Mboo_1092 CDS
T00578
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mbn
Methanoregula boonei
Pathway
mbn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mboo_1092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbn03019
]
Mboo_1092
03400 DNA repair and recombination proteins [BR:
mbn03400
]
Mboo_1092
Enzymes [BR:
mbn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mboo_1092
Messenger RNA biogenesis [BR:
mbn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mboo_1092
DNA repair and recombination proteins [BR:
mbn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mboo_1092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
ABS55610
UniProt:
A7I799
LinkDB
All DBs
Position
1085748..1087103
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AA seq
451 aa
AA seq
DB search
MNTTPTSIARIAPGSPENPLTLLRKYWGYPAFRPHQEAIIASIIGHNDTLAIMATGSGKS
LCYQLPAVYLGGLTIVISPLLALMKDQVDALNARGIPAAAWNSLLDSAGRSRIEAAMRDG
RLRILFVSPEKCLQPGFLEFLQEFPVRLVAIDEAHCISEWGHDFRPEYRDLARLRKCFPS
APVIALTATAVPEVRKDISRQLGLVKPQSFVGSFCRENLEYRVIKKKNPLVQLADICCRH
KNESGIVYCLSKKETEECAADLKKRGFTALAYHAGLSRPVREAVQDAFLKNTSRIVCATV
AFGMGIDKPDVRFVVHYDLPKSVEGYYQETGRAGRDGKPAECVLLYSRGDAVRIRYMLDH
DGAGEQASRIAQKKLRDMTGYCETIGCRRNFLLAYFGEQPARKNCGSCDACTGKVPGTEG
KIRSRRSPKRSGSAAPVGVTIPRRTYPIPSV
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
gtgaacacgacccccacatccatcgcacgtatcgcccccggatcgccggagaatcccctg
accctgctcaggaaatactggggttatccggcattccgcccgcaccaggaagcgatcatt
gcctccatcatcgggcacaacgatacgcttgcgatcatggcaaccggcagcgggaaatcg
ctctgctaccagctgccggcggtgtatcttggcggccttacgatcgtgatctcgccgctt
cttgcgctcatgaaagaccaggtggatgcgctcaatgcccggggcatcccggccgccgcg
tggaacagcctgctcgattcggccgggcgcagtcggatcgaggcggcgatgcgggacgga
aggctccggatcctctttgtctcaccggagaaatgcctgcagccgggatttctcgaattc
ctgcaggagtttccggtccggctcgttgccattgacgaggcgcattgcatatcggagtgg
ggccatgatttccggcccgagtaccgcgaccttgcccggctgcggaaatgcttcccgtcc
gcacccgtcatcgcgctcacggccacggcagttcccgaagtgcgaaaggatatcagccgg
cagctcggccttgtaaagccccaatcgttcgtgggcagtttctgccgggagaatctggag
taccgggtgataaagaagaagaacccgttagtccagctggcagacatctgctgccggcac
aaaaacgagtccggcattgtgtactgcttaagcaagaaagagaccgaggagtgcgcagcc
gatctcaagaagcgcggctttacggcgcttgcgtaccatgccggcctatcccgtccggtc
cgggaggccgtgcaggacgcgtttctcaaaaatacctcccggatcgtctgcgccacagtt
gcattcggcatgggcattgacaaacccgacgtgcggtttgtggtccattacgatctcccc
aagtctgttgagggctactatcaggagaccgggagggccgggcgggatgggaagcctgct
gaatgtgtcctgctctacagccggggggatgcagtccggatccggtatatgcttgaccat
gacggtgcgggtgaacaggcatcccggatagcgcaaaagaaactccgggacatgacggga
tactgcgagacaatcggctgccggagaaatttcctcctcgcgtattttggcgaacagccg
gcccggaaaaactgcgggtcctgcgatgcctgcaccgggaaagttcccggaaccgaagga
aagatccggtcccggcgttccccaaaacgatccgggagtgccgcaccggttggcgtcacg
atcccacggcgcacttacccgatcccgagcgtttaa
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