Methanoregula boonei: Mboo_1596
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Entry
Mboo_1596 CDS
T00578
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mbn
Methanoregula boonei
Pathway
mbn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mbn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Mboo_1596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbn03019
]
Mboo_1596
03009 Ribosome biogenesis [BR:
mbn03009
]
Mboo_1596
04131 Membrane trafficking [BR:
mbn04131
]
Mboo_1596
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mbn04147
]
Mboo_1596
Messenger RNA biogenesis [BR:
mbn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Mboo_1596
Ribosome biogenesis [BR:
mbn03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Mboo_1596
Membrane trafficking [BR:
mbn04131
]
SNARE
SNARE associated proteins
Others
Mboo_1596
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Mboo_1596
Exosome [BR:
mbn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Mboo_1596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
RuvB_N
CDC48_2
AAA_2
TIP49
AAA_16
AAA_33
AAA_22
AAA_14
AAA_5
RNA_helicase
AAA_28
Mg_chelatase
AAA_7
Parvo_NS1
nSTAND3
AAA_18
AAA_17
NPHP3_N
IstB_IS21
NB-ARC
AAA_3
TsaE
AAA_24
Bac_DnaA
AFG1_ATPase
SLFN-g3_helicase
DUF4349
DUF3240
Motif
Other DBs
NCBI-ProteinID:
ABS56113
UniProt:
A7I8Q2
LinkDB
All DBs
Position
1665165..1667570
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AA seq
801 aa
AA seq
DB search
MAESDFFEVTVKEAAHNDASRGIARLSVDVMKKLNLVSGDVIEIVGKKNAAAIVWPGFAE
DIGFAILRIDGSIRANANAGIDEKVKIRKSEAVYATKVVIQPTQATQLVGGEQYLSRVLR
GRSVVEGQTLRVDIIGNSVTFVIVRVSPRAIAIVSDDTEIELKNEPFNPEEGKREISSIQ
YEDIGGLERELQLVREMIELPLRHPELFEKLGIKPPKGVLFYGPPGTGKTLIAKAVANEV
DAHFSTLSGPEIMSKFYGDSEKALRDKFHDAEENAPSIIFIDEIDAIAPKREDVQGEVER
RIVAQLLALMDGLAGRGQVVVIAATNLPNSIDPALRRGGRFDREIEIGIPDKKGRLEIFQ
VHTRGVPLAKDVDIAALAETTFGFVGADIALLVKEAAMNAIRKIIPLIDINKQIPAEVIE
QLRITKNDFDTARKIVQPSALREVLIEIPDVAWEDIAGLDQTKDTLIKIIEGRLRYPKIF
EKLDYKPPRGILLFGPPGTGKTLLAKGIASKRQLNFISVKGPELLSKGVGDSEKHVREAF
RKARQSAPCIIFFDEIDALFPKRGTVADNTHVTESVLSQFLTELDGIEELKEVFVIGATN
RPDLLDPALLRPGRLEKHLYIPPPDEAARKAILATYLRGIEGVLDPDVNTGELAAQTRFF
VGADLEALVREAKAIVIDEVTGDGSTGEEKIPETVRITRQHFDAALEQVKGTLDGTDFER
YEQKSWDLLYAKNRREILYQAVGLINQVEYLRGKTTLKAGIIKQADELRDLVYWQRRSFD
EIRERTEKLRKALEACTKSPD
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatctgattttttcgaggtaacggtcaaagaggcggcgcacaacgatgcaagc
cggggtattgcccggctcagtgtcgatgtgatgaaaaaactcaaccttgtctcgggcgat
gtcatcgagatcgtgggaaagaagaacgctgcggcgattgtctggccgggctttgccgag
gacatcggctttgcgatcctccggatagacgggagcatacgggcaaacgcgaatgccggc
attgacgagaaggtgaagatccgcaaatccgaggcggtgtacgcgacaaaagtcgtgatc
cagccgacccaggccacccagctcgtgggcggggagcagtacctttcaagggtgctccgg
ggtcgctcggtggtagagggccagacgctccgcgtcgatatcatcgggaactccgtcacg
ttcgtgattgtccgggtctccccccgggccatcgcgattgtctccgatgacaccgagatc
gagctcaagaacgagccgttcaatcccgaagaaggaaagcgggagatctcctccatccag
tacgaggacatcggcggcctcgaacgcgagctccagctggtgcgcgagatgatcgaactc
cccctgcgccaccctgagctctttgaaaaactggggataaagcccccgaagggtgtcctc
ttctacggcccgccgggcacaggtaagaccctgattgcaaaggctgtggcaaacgaggta
gatgcccacttcagcacgctctcgggccccgagatcatgagcaagttctacggggacagc
gaaaaagccctgcgggacaagttccacgacgcggaggagaacgccccgtccatcatcttt
attgatgagatcgacgcgatcgcccccaagcgcgaggacgtgcagggagaggtggagcgc
cggatcgtggcacagctcctggccctcatggacggccttgccgggcggggacaggtcgta
gtgattgcggcaacaaacctccccaactccattgacccggcgctccggcgtggagggagg
tttgaccgcgagatcgagatcggcattccggacaagaagggacgtttagagatcttccag
gtgcacacccggggcgtgccgctggcaaaggacgtggatatcgccgcccttgccgagacc
acgtttgggtttgtgggcgccgatatcgcgcttctggtcaaggaagccgcgatgaacgcg
atccggaagatcatcccgctcatcgacatcaacaagcagatcccggccgaggtgattgag
cagctgcggatcacaaaaaacgatttcgatacggcccggaagattgtccagccaagcgcc
ctgcgcgaggtgcttatcgagatcccggatgtggcatgggaggatattgccgggcttgac
cagaccaaggatacgctgattaagatcatcgaggggcgcctgcggtacccgaagatcttc
gagaaactggactacaagcccccccgggggatcctcctctttggtccgcccgggaccggg
aaaacgctgcttgcaaagggcatcgcaagcaagcgccagctcaacttcatctcggtcaag
ggccccgagctcctctccaaaggggtgggagattccgagaagcatgtgagggaggcgttt
cgcaaggcccgccagtcggcgccctgtatcatcttctttgacgagatcgacgcgctcttc
ccgaaaagaggcacggttgccgacaacacgcacgtgaccgagagcgtgctctcccagttt
ttgaccgagctcgacggcatcgaggaactcaaggaggtctttgtgatcggggccaccaac
cgccccgacctgcttgacccggccctgctccgtcccggccggctcgaaaaacacctgtac
attcccccgccggatgaggcggcacgaaaagcgatccttgccacctatctccggggcatt
gagggagtccttgacccggacgtgaacaccggtgaacttgccgcacagacccggtttttt
gtgggcgctgatctcgaagcgctggtaagagaggcaaaggcgatcgtgatcgatgaggtg
accggggatggcagcaccggggaggagaagataccggagacggtccggatcacccggcag
catttcgatgctgcgctggaacaggtcaagggcacacttgacggaacggacttcgaacgg
tacgagcagaagtcctgggacctcctgtacgcgaaaaacaggcgcgagatcctgtaccag
gcagtcggtctcatcaaccaggtcgagtacctcagggggaaaaccacgcttaaagccggg
atcataaaacaggccgacgaactgcgggatctcgtgtactggcagcggcgttcgtttgac
gagatccgggaacgtaccgaaaagctccggaaggcgcttgaagcatgtaccaaatctccg
gattaa
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