Methanoregula boonei: Mboo_2236
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Entry
Mboo_2236 CDS
T00578
Name
(GenBank) phosphoesterase, RecJ domain protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mbn
Methanoregula boonei
Pathway
mbn03410
Base excision repair
mbn03430
Mismatch repair
mbn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mboo_2236
03430 Mismatch repair
Mboo_2236
03440 Homologous recombination
Mboo_2236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbn03400
]
Mboo_2236
DNA repair and recombination proteins [BR:
mbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Mboo_2236
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Mboo_2236
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Mboo_2236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
ABS56750
UniProt:
A7IAI9
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All DBs
Position
2305047..2306264
Genome browser
AA seq
405 aa
AA seq
DB search
MSLEESAKVVAEQIRRQQFVEVYAHHDADGIAAGAILCHAMLRAGIRFRLRICADISAAE
LSHDAVSLLCDLGSGKEDLPPETIVVDHHIPLFGGQFHANPRLEKIDGDRELSAAGMAYI
VAQEMGDNRDLAGLVIPGIIGDGQAFAGRNLAIFNEGVANGIIVPDKGITLAGRDMAERW
LLATRPYLPGISGSDSAVADLLASTQEDNGLKPDVLISLAVLTSVPEASAEGLMLLYGDT
MHLQREVIEDAHALTAVIDACGKSGCGDLAVALCLRSSVEITEAWEVTRKHHLAVIAALG
EVRPVQEGCAVYECGNATLSSDVADVLARDRVQQAPVLVYARTGEECRISTRLPHGTTAN
LGLLVRELAAACGGNGGGHHSRAGATIPCKRLDAFVKGWQEGLAA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttgaagaatccgctaaagtcgtcgcagagcagatccggcgccagcagttcgta
gaggtatacgcccaccacgacgctgatggcattgcagcaggggctatcctctgccacgcg
atgctccgggccgggatccggttcaggctccggatctgtgcggatatctcagcggcggag
ctctcgcacgatgcggtctcgctcctgtgcgacctgggatccggtaaagaagacctgccc
ccggagacgatcgtggttgatcaccacatcccgctctttggcgggcagttccacgcaaac
ccgcgcctggaaaagatcgatggcgaccgggagctctctgcggccggcatggcctacatc
gttgctcaggaaatgggggacaaccgggaccttgccggtctcgtaatccccggcatcatc
ggcgatggccaggcatttgccggcaggaacctcgcgatcttcaacgaaggtgtggcaaac
gggattattgtcccggacaaggggataacccttgccggccgtgacatggcggaacggtgg
ctgcttgccacccgtccttatctccccgggatcagcggcagcgattcagccgttgctgac
ctgctcgcttccactcaggaagacaacgggttgaaaccggatgttctgatcagccttgcg
gtgctcacttctgtcccggaggcgtcggcagagggtcttatgctgctctacggcgacacc
atgcacctccagcgcgaggttatcgaggacgcccacgcgcttaccgctgtcatcgatgcc
tgcggcaaatccggctgcggcgaccttgcggtggcgctctgcctgcgttcatctgtggag
atcacagaggcttgggaggtgacccgtaagcaccacctcgcggtgattgcagcgcttggc
gaggtccgtccggtacaggagggttgtgcagtctacgaatgcggcaatgccaccctttca
agcgacgttgccgatgtgcttgcccgggaccgggtgcagcaggcaccggtgctcgtgtac
gcacgaacaggggaggagtgccggatatcgacccgcctaccccatggcaccactgccaat
ctcgggctgcttgtccgggaactcgccgcggcttgcggtgggaacggcgggggccaccac
agccgggcaggggccacgatcccctgcaagcgactcgatgccttcgtgaagggatggcag
gaggggcttgctgcatga
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