Mycobacterium tuberculosis variant bovis AF2122/97: BQ2027_MB3486C
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Entry
BQ2027_MB3486C CDS
T00132
Symbol
rpoA
Name
(GenBank) PROBABLE DNA-DIRECTED RNA POLYMERASE (ALPHA CHAIN) RPOA (TRANSCRIPTASE ALPHA CHAIN) (RNA POLYMERASE ALPHA SUBUNIT) (DNA-DIRECTED RNA NUCLEOTIDYLTRANSFERASE)
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mbo
Mycobacterium tuberculosis variant bovis AF2122/97
Pathway
mbo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mbo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BQ2027_MB3486C (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbo03021
]
BQ2027_MB3486C (rpoA)
03400 DNA repair and recombination proteins [BR:
mbo03400
]
BQ2027_MB3486C (rpoA)
Enzymes [BR:
mbo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BQ2027_MB3486C (rpoA)
Transcription machinery [BR:
mbo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BQ2027_MB3486C (rpoA)
DNA repair and recombination proteins [BR:
mbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BQ2027_MB3486C (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
SIU02114
Pasteur:
Mb3486c
UniProt:
P66702
A0A679LJE0
LinkDB
All DBs
Position
complement(3829577..3830620)
Genome browser
AA seq
347 aa
AA seq
DB search
MLISQRPTLSEDVLTDNRSQFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTEIILNLKSLVVSSEEDEPVTMYLRKQGPGEVTAGDIVPPAGVTVHN
PGMHIATLNDKGKLEVELVVERGRGYVPAVQNRASGAEIGRIPVDSIYSPVLKVTYKVDA
TRVEQRTDFDKLILDVETKNSISPRDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFALPIDDLDLTVRSYNCLKREGVHTVGELVARTESDLLDIRNFGQKSIDEVKIK
LHQLGLSLKDSPPSFDPSEVAGYDVATGTWSTEGAYDEQDYAETEQL
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgctgatctcacagcgccccaccctgtccgaggacgtcctcaccgacaaccgatcccag
ttcgtgatcgaaccgctggagccgggattcggctacaccctgggcaattcgctgcgtcgc
accctgctgtcgtcgattcccggagcggccgtcaccagcattcgcatcgatggtgtactg
cacgaattcaccacggtgcccggggtcaaagaagatgtcaccgagatcatcctgaatctc
aagagcctggtggtgtcctcggaggaggacgagccggtcaccatgtacctacgcaagcag
ggtccgggtgaggttaccgccggcgacatcgtgccgccggccggcgtcaccgtgcacaac
cccggcatgcacatcgccacgctgaacgataagggcaagctggaagtcgagctcgtcgtc
gagcgtggccgcggctatgtcccggcggtgcaaaaccgggcttcgggtgccgaaattggg
cgcattccagtcgattccatctactcaccggtgctcaaagtgacctacaaggtggacgcc
acccgggtcgagcagcgcaccgacttcgacaagctgatcctggacgtggagaccaagaat
tcaatcagcccgcgcgacgcgctggcgtcggctggcaagacgctggtcgagttgttcggc
ctggcacgggaactcaacgtcgaggccgaaggcatcgagatcgggccgtcgccggccgag
gccgatcacattgcgtcattcgccctgccgatcgacgacctggatctgacggtgcggtcc
tacaactgcctcaagcgcgagggggtgcacaccgtgggcgaactggtggcgcgcaccgaa
tccgacctgcttgacatccgcaacttcggtcagaagtccatcgacgaggtgaagatcaag
ctgcaccagctgggcctgtcactcaaggacagcccgccgagcttcgacccctcggaggtc
gcgggctacgacgtcgccaccggcacctggtcgaccgagggcgcgtacgacgagcaggac
tacgccgaaaccgaacagctttag
DBGET
integrated database retrieval system
